STRINGSTRING
opuCA opuCA BN159_1135 BN159_1135 BN159_1136 BN159_1136 BN159_1137 BN159_1137 BN159_2288 BN159_2288 BN159_2293 BN159_2293 BN159_2294 BN159_2294 BN159_2295 BN159_2295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
opuCAGlycine betaine/carnitine/choline transport ATP-binding protein OpuCA. (384 aa)
BN159_1135Amino acid ABC transporter amino acid-binding protein. (311 aa)
BN159_1136ABC transporter permease. (223 aa)
BN159_1137ABC transporter permease. (226 aa)
BN159_2288Secreted substrate-binding protein. (299 aa)
BN159_2293ABC transporter permease. (224 aa)
BN159_2294ABC transporter permease. (216 aa)
BN159_2295D-methionine ABC transporter, ATP-binding protein. (379 aa)
Your Current Organism:
Streptomyces davaonensis
NCBI taxonomy Id: 1214101
Other names: S. davaonensis JCM 4913, Streptomyces davaonensis 768, Streptomyces davaonensis JCM 4913, Streptomyces davawensis 768, Streptomyces davawensis JCM 4913
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