(8 nodes) Mixed, incl. Protein import, and Capsule biosynthesis CapC network (Streptomyces collinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS68475.1	TolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system. (295 aa)
	AGS69590.1	Hypothetical protein. (325 aa)
	AGS70044.1	Lipoprotein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase. (228 aa)
	AGS72615.1	Hypothetical protein. (753 aa)
	AGS72616.1	Mur ligase middle domain-containing protein. (550 aa)
	AGS72617.1	Poly-gamma-glutamate synthesis protein PgsC. (160 aa)
	AGS72618.1	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins). (352 aa)
	AGS72619.1	Hypothetical protein. (81 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS68475.1	AGS69590.1	B446_08255	B446_13860	TolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.	Hypothetical protein.	0.577
AGS68475.1	AGS70044.1	B446_08255	B446_16130	TolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.	Lipoprotein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase.	0.482
AGS69590.1	AGS68475.1	B446_13860	B446_08255	Hypothetical protein.	TolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.	0.577
AGS69590.1	AGS72619.1	B446_13860	B446_29065	Hypothetical protein.	Hypothetical protein.	0.577
AGS70044.1	AGS68475.1	B446_16130	B446_08255	Lipoprotein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase.	TolB protein; COG0823 Periplasmic component of the Tol biopolymer transport system.	0.482
AGS70044.1	AGS72619.1	B446_16130	B446_29065	Lipoprotein; COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase.	Hypothetical protein.	0.482
AGS72615.1	AGS72616.1	B446_29045	B446_29050	Hypothetical protein.	Mur ligase middle domain-containing protein.	0.788
AGS72615.1	AGS72617.1	B446_29045	B446_29055	Hypothetical protein.	Poly-gamma-glutamate synthesis protein PgsC.	0.788
AGS72615.1	AGS72618.1	B446_29045	B446_29060	Hypothetical protein.	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).	0.671
AGS72615.1	AGS72619.1	B446_29045	B446_29065	Hypothetical protein.	Hypothetical protein.	0.463
AGS72616.1	AGS72615.1	B446_29050	B446_29045	Mur ligase middle domain-containing protein.	Hypothetical protein.	0.788
AGS72616.1	AGS72617.1	B446_29050	B446_29055	Mur ligase middle domain-containing protein.	Poly-gamma-glutamate synthesis protein PgsC.	0.950
AGS72616.1	AGS72618.1	B446_29050	B446_29060	Mur ligase middle domain-containing protein.	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).	0.671
AGS72616.1	AGS72619.1	B446_29050	B446_29065	Mur ligase middle domain-containing protein.	Hypothetical protein.	0.463
AGS72617.1	AGS72615.1	B446_29055	B446_29045	Poly-gamma-glutamate synthesis protein PgsC.	Hypothetical protein.	0.788
AGS72617.1	AGS72616.1	B446_29055	B446_29050	Poly-gamma-glutamate synthesis protein PgsC.	Mur ligase middle domain-containing protein.	0.950
AGS72617.1	AGS72618.1	B446_29055	B446_29060	Poly-gamma-glutamate synthesis protein PgsC.	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).	0.671
AGS72617.1	AGS72619.1	B446_29055	B446_29065	Poly-gamma-glutamate synthesis protein PgsC.	Hypothetical protein.	0.463
AGS72618.1	AGS72615.1	B446_29060	B446_29045	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).	Hypothetical protein.	0.671
AGS72618.1	AGS72616.1	B446_29060	B446_29050	Secreted protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).	Mur ligase middle domain-containing protein.	0.671