39 items (Streptomyces collinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS66932.1	COG1960 Acyl-CoA dehydrogenases. (402 aa)
	AGS66933.1	COG1960 Acyl-CoA dehydrogenases. (343 aa)
	AGS67031.1	COG1960 Acyl-CoA dehydrogenases. (386 aa)
	AGS67063.1	COG1960 Acyl-CoA dehydrogenases. (655 aa)
	AGS67355.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (248 aa)
	AGS67463.1	COG1250 3-hydroxyacyl-CoA dehydrogenase. (300 aa)
	AGS67464.1	COG1960 Acyl-CoA dehydrogenases. (390 aa)
	AGS67465.1	COG1960 Acyl-CoA dehydrogenases. (390 aa)
	AGS67525.1	COG1960 Acyl-CoA dehydrogenases. (653 aa)
	AGS67772.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (266 aa)
	AGS67884.1	COG1960 Acyl-CoA dehydrogenases. (574 aa)
	AGS68199.1	3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
	AGS68259.1	COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (655 aa)
	AGS68302.1	COG1960 Acyl-CoA dehydrogenases. (390 aa)
	AGS68471.1	COG1250 3-hydroxyacyl-CoA dehydrogenase. (277 aa)
	AGS68638.1	COG1960 Acyl-CoA dehydrogenases. (396 aa)
	AGS68939.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (385 aa)
	AGS69244.1	Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	AGS69271.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
	AGS69745.1	COG1960 Acyl-CoA dehydrogenases. (385 aa)
	AGS69747.1	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). (538 aa)
	AGS69749.1	hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases. (313 aa)
	AGS69750.1	COG1960 Acyl-CoA dehydrogenases. (386 aa)
	AGS70020.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
	AGS70219.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (264 aa)
	AGS70254.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (245 aa)
	AGS71438.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (264 aa)
	AGS71647.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)
	AGS71859.1	COG1250 3-hydroxyacyl-CoA dehydrogenase. (282 aa)
	AGS71873.1	Acyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	AGS71926.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	AGS72375.1	COG1960 Acyl-CoA dehydrogenases. (377 aa)
	AGS72459.1	Fatty acid oxidation complex alpha-subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase. (709 aa)
	AGS72460.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
	AGS72923.1	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (214 aa)
	AGS72924.1	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (251 aa)
	AGS72945.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
	AGS72946.1	Fatty acid oxidative multifunctional enzyme; COG1024 Enoyl-CoA hydratase/carnithine racemase. (727 aa)
	AGS73013.1	beta-ketoadipyl-CoA thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS66932.1	AGS66933.1	B446_00460	B446_00465	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.967
AGS66932.1	AGS67031.1	B446_00460	B446_00965	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.902
AGS66932.1	AGS67355.1	B446_00460	B446_02615	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777
AGS66932.1	AGS67463.1	B446_00460	B446_03155	COG1960 Acyl-CoA dehydrogenases.	COG1250 3-hydroxyacyl-CoA dehydrogenase.	0.402
AGS66932.1	AGS67464.1	B446_00460	B446_03160	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.920
AGS66932.1	AGS67465.1	B446_00460	B446_03165	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.922
AGS66932.1	AGS67772.1	B446_00460	B446_04720	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777
AGS66932.1	AGS67884.1	B446_00460	B446_05290	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.915
AGS66932.1	AGS68199.1	B446_00460	B446_06875	COG1960 Acyl-CoA dehydrogenases.	3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS68471.1	B446_00460	B446_08235	COG1960 Acyl-CoA dehydrogenases.	COG1250 3-hydroxyacyl-CoA dehydrogenase.	0.402
AGS66932.1	AGS68638.1	B446_00460	B446_09070	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.915
AGS66932.1	AGS68939.1	B446_00460	B446_10585	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69244.1	B446_00460	B446_12110	COG1960 Acyl-CoA dehydrogenases.	Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69271.1	B446_00460	B446_12245	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69745.1	B446_00460	B446_14635	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.920
AGS66932.1	AGS69747.1	B446_00460	B446_14645	COG1960 Acyl-CoA dehydrogenases.	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).	0.917
AGS66932.1	AGS69750.1	B446_00460	B446_14660	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.932
AGS66932.1	AGS70020.1	B446_00460	B446_16010	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS70254.1	B446_00460	B446_17190	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777
AGS66932.1	AGS71859.1	B446_00460	B446_25240	COG1960 Acyl-CoA dehydrogenases.	COG1250 3-hydroxyacyl-CoA dehydrogenase.	0.402