(12 nodes) Mixed, incl. Type II secretion system GspF domain superfamily, and TadE-like network (Streptomyces collinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS71498.1	Hypothetical protein. (280 aa)
	AGS71499.1	COG3745 Flp pilus assembly protein CpaB. (235 aa)
	AGS71500.1	Septum site-determining protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (410 aa)
	AGS71501.1	Septum site-determining protein. (127 aa)
	AGS71502.1	Septum site-determining protein. (156 aa)
	AGS71503.1	COG4962 Flp pilus assembly protein, ATPase CpaF. (445 aa)
	AGS71504.1	Integral membrane protein; COG4965 Flp pilus assembly protein TadB. (314 aa)
	AGS71505.1	Integral membrane protein; COG2064 Flp pilus assembly protein TadC. (295 aa)
	AGS71508.1	Hypothetical protein. (50 aa)
	AGS71509.1	Hypothetical protein. (178 aa)
	AGS71510.1	Hypothetical protein. (193 aa)
	AGS71511.1	COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (206 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS71498.1	AGS71499.1	B446_23430	B446_23435	Hypothetical protein.	COG3745 Flp pilus assembly protein CpaB.	0.797
AGS71498.1	AGS71500.1	B446_23430	B446_23440	Hypothetical protein.	Septum site-determining protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	0.794
AGS71498.1	AGS71501.1	B446_23430	B446_23445	Hypothetical protein.	Septum site-determining protein.	0.794
AGS71498.1	AGS71502.1	B446_23430	B446_23450	Hypothetical protein.	Septum site-determining protein.	0.794
AGS71498.1	AGS71503.1	B446_23430	B446_23455	Hypothetical protein.	COG4962 Flp pilus assembly protein, ATPase CpaF.	0.794
AGS71498.1	AGS71504.1	B446_23430	B446_23460	Hypothetical protein.	Integral membrane protein; COG4965 Flp pilus assembly protein TadB.	0.793
AGS71498.1	AGS71505.1	B446_23430	B446_23465	Hypothetical protein.	Integral membrane protein; COG2064 Flp pilus assembly protein TadC.	0.784
AGS71498.1	AGS71508.1	B446_23430	B446_23480	Hypothetical protein.	Hypothetical protein.	0.646
AGS71498.1	AGS71509.1	B446_23430	B446_23485	Hypothetical protein.	Hypothetical protein.	0.633
AGS71498.1	AGS71510.1	B446_23430	B446_23490	Hypothetical protein.	Hypothetical protein.	0.631
AGS71498.1	AGS71511.1	B446_23430	B446_23495	Hypothetical protein.	COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.	0.631
AGS71499.1	AGS71498.1	B446_23435	B446_23430	COG3745 Flp pilus assembly protein CpaB.	Hypothetical protein.	0.797
AGS71499.1	AGS71500.1	B446_23435	B446_23440	COG3745 Flp pilus assembly protein CpaB.	Septum site-determining protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.	0.993
AGS71499.1	AGS71501.1	B446_23435	B446_23445	COG3745 Flp pilus assembly protein CpaB.	Septum site-determining protein.	0.864
AGS71499.1	AGS71502.1	B446_23435	B446_23450	COG3745 Flp pilus assembly protein CpaB.	Septum site-determining protein.	0.969
AGS71499.1	AGS71503.1	B446_23435	B446_23455	COG3745 Flp pilus assembly protein CpaB.	COG4962 Flp pilus assembly protein, ATPase CpaF.	0.951
AGS71499.1	AGS71504.1	B446_23435	B446_23460	COG3745 Flp pilus assembly protein CpaB.	Integral membrane protein; COG4965 Flp pilus assembly protein TadB.	0.985
AGS71499.1	AGS71505.1	B446_23435	B446_23465	COG3745 Flp pilus assembly protein CpaB.	Integral membrane protein; COG2064 Flp pilus assembly protein TadC.	0.991
AGS71499.1	AGS71508.1	B446_23435	B446_23480	COG3745 Flp pilus assembly protein CpaB.	Hypothetical protein.	0.664
AGS71499.1	AGS71509.1	B446_23435	B446_23485	COG3745 Flp pilus assembly protein CpaB.	Hypothetical protein.	0.647