(7 nodes) DNA ligase (ATP) activity, and Ku70/Ku80 beta-barrel domain network (Streptomyces collinus)

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second shell of interactors

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Predicted Interactions

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protein homology

Your Input:
	AGS67635.1	Hypothetical protein; COG1793 ATP-dependent DNA ligase. (203 aa)
	AGS67644.1	COG1793 ATP-dependent DNA ligase. (327 aa)
	AGS71808.1	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase. (281 aa)
	ku	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (370 aa)
	ku-2	Ku70/Ku80 protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (329 aa)
	ligC	COG1793 ATP-dependent DNA ligase. (354 aa)
	AGS72929.1	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase. (347 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS67635.1	AGS67644.1	B446_04035	B446_04080	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	COG1793 ATP-dependent DNA ligase.	0.996
AGS67635.1	AGS71808.1	B446_04035	B446_24985	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	0.992
AGS67635.1	AGS72929.1	B446_04035	B446_30625	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	0.978
AGS67635.1	ku	B446_04035	B446_24990	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.887
AGS67635.1	ku-2	B446_04035	B446_25000	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	Ku70/Ku80 protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.839
AGS67635.1	ligC	B446_04035	B446_30620	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	COG1793 ATP-dependent DNA ligase.	0.979
AGS67644.1	AGS67635.1	B446_04080	B446_04035	COG1793 ATP-dependent DNA ligase.	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	0.996
AGS67644.1	AGS71808.1	B446_04080	B446_24985	COG1793 ATP-dependent DNA ligase.	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	0.999
AGS67644.1	AGS72929.1	B446_04080	B446_30625	COG1793 ATP-dependent DNA ligase.	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	0.979
AGS67644.1	ku	B446_04080	B446_24990	COG1793 ATP-dependent DNA ligase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.905
AGS67644.1	ku-2	B446_04080	B446_25000	COG1793 ATP-dependent DNA ligase.	Ku70/Ku80 protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.936
AGS71808.1	AGS67635.1	B446_24985	B446_04035	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	0.992
AGS71808.1	AGS67644.1	B446_24985	B446_04080	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	COG1793 ATP-dependent DNA ligase.	0.999
AGS71808.1	ku	B446_24985	B446_24990	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.986
AGS71808.1	ku-2	B446_24985	B446_25000	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	Ku70/Ku80 protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.926
AGS71808.1	ligC	B446_24985	B446_30620	DNA ligase; COG3285 Predicted eukaryotic-type DNA primase.	COG1793 ATP-dependent DNA ligase.	0.965
AGS72929.1	AGS67635.1	B446_30625	B446_04035	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	Hypothetical protein; COG1793 ATP-dependent DNA ligase.	0.978
AGS72929.1	AGS67644.1	B446_30625	B446_04080	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	COG1793 ATP-dependent DNA ligase.	0.979
AGS72929.1	ku	B446_30625	B446_24990	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.899
AGS72929.1	ku-2	B446_30625	B446_25000	Hypothetical protein; COG3285 Predicted eukaryotic-type DNA primase.	Ku70/Ku80 protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.899