STRINGSTRING
AGS67674.1 AGS67674.1 AGS67739.1 AGS67739.1 AGS67740.1 AGS67740.1 AGS67741.1 AGS67741.1 AGS68607.1 AGS68607.1 AGS68608.1 AGS68608.1 AGS68609.1 AGS68609.1 AGS68610.1 AGS68610.1 AGS68611.1 AGS68611.1 AGS68612.1 AGS68612.1 AGS69876.1 AGS69876.1 AGS70170.1 AGS70170.1 AGS70171.1 AGS70171.1 AGS70172.1 AGS70172.1 AGS70234.1 AGS70234.1 AGS70235.1 AGS70235.1 AGS73452.1 AGS73452.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGS67674.1COG2335 Secreted and surface protein containing fasciclin-like repeats. (192 aa)
AGS67739.1Hypothetical protein. (58 aa)
AGS67740.1Oxidoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. (507 aa)
AGS67741.1COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (458 aa)
AGS68607.1Hypothetical protein. (58 aa)
AGS68608.1COG5343 Uncharacterized protein conserved in bacteria. (272 aa)
AGS68609.1COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (180 aa)
AGS68610.1Hypothetical protein. (513 aa)
AGS68611.1Hypothetical protein; COG0457 FOG: TPR repeat. (600 aa)
AGS68612.1Hypothetical protein. (577 aa)
AGS69876.1Hypothetical protein; COG0457 FOG: TPR repeat. (496 aa)
AGS70170.1COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (194 aa)
AGS70171.1Hypothetical protein. (255 aa)
AGS70172.1Lipoprotein; COG2335 Secreted and surface protein containing fasciclin-like repeats. (219 aa)
AGS70234.1COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. (200 aa)
AGS70235.1Hypothetical protein. (463 aa)
AGS73452.1COG2343 Uncharacterized protein conserved in bacteria. (161 aa)
Your Current Organism:
Streptomyces collinus
NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365
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