21 items (Streptomyces collinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS67684.1	FAD-binding dehydrogenase; COG3573 Predicted oxidoreductase. (557 aa)
	AGS67771.1	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (313 aa)
	AGS68262.1	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (141 aa)
	AGS68936.1	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (283 aa)
	AGS68937.1	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (246 aa)
	AGS68938.1	enoyl-ACP reductase II; COG2070 Dioxygenases related to 2-nitropropane dioxygenase. (352 aa)
	AGS69117.1	NAD dependent epimerase/dehydratase family protein; COG1090 Predicted nucleoside-diphosphate sugar epimerase. (298 aa)
	AGS69486.1	Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (263 aa)
	AGS70203.1	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (135 aa)
	AGS70215.1	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (131 aa)
	AGS70552.1	Hypothetical protein; COG2030 Acyl dehydratase. (231 aa)
	AGS70553.1	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon. (327 aa)
	AGS70971.1	L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (553 aa)
	AGS71038.1	Dehydrogenase; COG4221 Short-chain alcohol dehydrogenase of unknown specificity. (258 aa)
	AGS71301.1	Cholesterol oxidase; COG2303 Choline dehydrogenase and related flavoproteins. (596 aa)
	sdhA1	COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (584 aa)
	sdhA2	COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (643 aa)
	AGS72779.1	Phenylacetic acid degradation NADH oxidoreductase PaaE; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (372 aa)
	AGS72827.1	Dehydrogenase; COG4221 Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (233 aa)
	AGS73083.1	Fatty acid hydroxylase; COG3000 Sterol desaturase. (277 aa)
	sdhA3	COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (649 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS67771.1	AGS68262.1	B446_04715	B446_07190	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.472
AGS67771.1	AGS68936.1	B446_04715	B446_10570	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.763
AGS67771.1	AGS68937.1	B446_04715	B446_10575	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.774
AGS67771.1	AGS68938.1	B446_04715	B446_10580	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	enoyl-ACP reductase II; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.	0.712
AGS67771.1	AGS70203.1	B446_04715	B446_16935	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.525
AGS67771.1	AGS70552.1	B446_04715	B446_18690	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG2030 Acyl dehydratase.	0.835
AGS67771.1	AGS70553.1	B446_04715	B446_18695	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.769
AGS68262.1	AGS67771.1	B446_07190	B446_04715	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.472
AGS68262.1	AGS68936.1	B446_07190	B446_10570	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.498
AGS68262.1	AGS68937.1	B446_07190	B446_10575	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.606
AGS68262.1	AGS70552.1	B446_07190	B446_18690	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG2030 Acyl dehydratase.	0.621
AGS68262.1	AGS70553.1	B446_07190	B446_18695	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.453
AGS68936.1	AGS67771.1	B446_10570	B446_04715	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.763
AGS68936.1	AGS68262.1	B446_10570	B446_07190	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.498
AGS68936.1	AGS68937.1	B446_10570	B446_10575	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.999
AGS68936.1	AGS68938.1	B446_10570	B446_10580	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	enoyl-ACP reductase II; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.	0.995
AGS68936.1	AGS70203.1	B446_10570	B446_16935	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.666
AGS68936.1	AGS70215.1	B446_10570	B446_16995	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.482
AGS68936.1	AGS70552.1	B446_10570	B446_18690	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG2030 Acyl dehydratase.	0.772
AGS68936.1	AGS70553.1	B446_10570	B446_18695	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.	0.770