(16 nodes) Siderophore biosynthetic process network (Streptomyces collinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS67132.1	COG3251 Uncharacterized protein conserved in bacteria. (66 aa)
	AGS67143.1	COG3251 Uncharacterized protein conserved in bacteria. (74 aa)
	kirP	COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily. (251 aa)
	AGS69755.1	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (179 aa)
	AGS69756.1	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component. (589 aa)
	AGS70510.1	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (212 aa)
	AGS71568.1	COG3251 Uncharacterized protein conserved in bacteria. (74 aa)
	AGS72236.1	Iron transport protein; COG4264 Siderophore synthetase component. (722 aa)
	AGS72237.1	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (271 aa)
	AGS72652.1	Iron transport protein; COG4264 Siderophore synthetase component. (514 aa)
	AGS72653.1	Iron transport protein; COG4264 Siderophore synthetase component. (499 aa)
	AGS72899.1	COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily. (232 aa)
	AGS73344.1	MbtH domain-containing protein; COG3251 Uncharacterized protein conserved in bacteria. (67 aa)
	kirP-2	Putative Sfp type phosphopantetheinyl transferase; COG2977 Phosphopantetheinyl transferase component of siderophore synthetase. (251 aa)
	AGS73551.1	COG3251 Uncharacterized protein conserved in bacteria. (74 aa)
	AGS73562.1	COG3251 Uncharacterized protein conserved in bacteria. (66 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS69755.1	AGS69756.1	B446_14685	B446_14690	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	0.997
AGS69755.1	AGS72236.1	B446_14685	B446_27140	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.791
AGS69755.1	AGS72652.1	B446_14685	B446_29230	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.531
AGS69755.1	AGS72653.1	B446_14685	B446_29235	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.599
AGS69756.1	AGS69755.1	B446_14690	B446_14685	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.997
AGS69756.1	AGS70510.1	B446_14690	B446_18470	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.932
AGS69756.1	AGS72236.1	B446_14690	B446_27140	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	Iron transport protein; COG4264 Siderophore synthetase component.	0.774
AGS69756.1	AGS72237.1	B446_14690	B446_27145	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.920
AGS69756.1	AGS72653.1	B446_14690	B446_29235	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	Iron transport protein; COG4264 Siderophore synthetase component.	0.605
AGS70510.1	AGS69756.1	B446_18470	B446_14690	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	0.932
AGS70510.1	AGS72236.1	B446_18470	B446_27140	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.707
AGS70510.1	AGS72652.1	B446_18470	B446_29230	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.631
AGS70510.1	AGS72653.1	B446_18470	B446_29235	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.596
AGS72236.1	AGS69755.1	B446_27140	B446_14685	Iron transport protein; COG4264 Siderophore synthetase component.	Aceytltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.791
AGS72236.1	AGS69756.1	B446_27140	B446_14690	Iron transport protein; COG4264 Siderophore synthetase component.	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	0.774
AGS72236.1	AGS70510.1	B446_27140	B446_18470	Iron transport protein; COG4264 Siderophore synthetase component.	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.707
AGS72236.1	AGS72237.1	B446_27140	B446_27145	Iron transport protein; COG4264 Siderophore synthetase component.	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	0.916
AGS72237.1	AGS69756.1	B446_27145	B446_14690	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Siderophore biosynthetic enzyme; COG4264 Siderophore synthetase component.	0.920
AGS72237.1	AGS72236.1	B446_27145	B446_27140	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.916
AGS72237.1	AGS72652.1	B446_27145	B446_29230	Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.	Iron transport protein; COG4264 Siderophore synthetase component.	0.448