9 items (Streptomyces collinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS72958.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (247 aa)
	AGS71438.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (264 aa)
	AGS70254.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (245 aa)
	AGS70219.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (264 aa)
	AGS67772.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (266 aa)
	AGS67355.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (248 aa)
	AGS71926.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	AGS72371.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)
	AGS71647.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS67355.1	AGS70219.1	B446_02615	B446_17015	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.932
AGS67355.1	AGS71647.1	B446_02615	B446_24180	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.977
AGS67772.1	AGS70219.1	B446_04720	B446_17015	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.927
AGS67772.1	AGS71647.1	B446_04720	B446_24180	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.931
AGS70219.1	AGS67355.1	B446_17015	B446_02615	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.932
AGS70219.1	AGS67772.1	B446_17015	B446_04720	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.927
AGS70219.1	AGS70254.1	B446_17015	B446_17190	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.931
AGS70219.1	AGS71647.1	B446_17015	B446_24180	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.917
AGS70254.1	AGS70219.1	B446_17190	B446_17015	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.931
AGS70254.1	AGS71647.1	B446_17190	B446_24180	COG1024 Enoyl-CoA hydratase/carnithine racemase.	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.979
AGS71647.1	AGS67355.1	B446_24180	B446_02615	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.977
AGS71647.1	AGS67772.1	B446_24180	B446_04720	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.931
AGS71647.1	AGS70219.1	B446_24180	B446_17015	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.917
AGS71647.1	AGS70254.1	B446_24180	B446_17190	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.979