Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGS67027.1 | AGS68756.1 | B446_00945 | B446_09665 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Hypothetical protein; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase. | 0.816 |
| AGS67027.1 | AGS70605.1 | B446_00945 | B446_18955 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.921 |
| AGS67027.1 | AGS70940.1 | B446_00945 | B446_20640 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0076 Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family. | 0.830 |
| AGS67027.1 | AGS71201.1 | B446_00945 | B446_21945 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0436 Aspartate/tyrosine/aromatic aminotransferase. | 0.919 |
| AGS67027.1 | AGS73087.1 | B446_00945 | B446_31415 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase. | 0.837 |
| AGS67027.1 | hisC | B446_00945 | B446_10770 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.816 |
| AGS67027.1 | pat | B446_00945 | B446_18890 | Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase. | Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.816 |
| AGS67229.1 | AGS68818.1 | B446_01985 | B446_09975 | Class V aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. | Aminotransferase; COG0520 Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.541 |
| AGS67229.1 | AGS69080.1 | B446_01985 | B446_11290 | Class V aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. | Pyridoxalphosphate dependent protein; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; Belongs to the sulfur carrier protein TusA family. | 0.924 |
| AGS67229.1 | AGS71955.1 | B446_01985 | B446_25735 | Class V aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. | Pyridoxal-phosphate-dependent aminotransferase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. | 0.917 |
| AGS67396.1 | AGS68767.1 | B446_02820 | B446_09720 | Hypothetical protein; COG0520 Selenocysteine lyase. | Hypothetical protein; COG0520 Selenocysteine lyase. | 0.653 |
| AGS67616.1 | hemL | B446_03930 | B446_21275 | Aminotransferase; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | COG0001 Glutamate-1-semialdehyde aminotransferase. | 0.922 |
| AGS67944.1 | AGS73100.1 | B446_05590 | B446_31480 | Aldolase; COG2008 Threonine aldolase. | COG2008 Threonine aldolase. | 0.901 |
| AGS67944.1 | gcvP | B446_05590 | B446_07100 | Aldolase; COG2008 Threonine aldolase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.948 |
| AGS67944.1 | glyA | B446_05590 | B446_25635 | Aldolase; COG2008 Threonine aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| AGS67944.1 | glyA-2 | B446_05590 | B446_22710 | Aldolase; COG2008 Threonine aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| AGS67944.1 | glyA-3 | B446_05590 | B446_25145 | Aldolase; COG2008 Threonine aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| AGS67944.1 | kbl | B446_05590 | B446_30960 | Aldolase; COG2008 Threonine aldolase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.911 |
| AGS68099.1 | AGS72979.1 | B446_06375 | B446_30875 | COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aminotransferase; COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.918 |
| AGS68125.1 | AGS70843.1 | B446_06505 | B446_20155 | 8-amino-7-oxononanoate synthase; COG0156 7-keto-8-aminopelargonate synthetase and related enzymes. | Hypothetical protein; COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.510 |
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