STRINGSTRING
AGS67146.1 AGS67146.1 aspA aspA AGS68138.1 AGS68138.1 argH argH fumC fumC AGS72920.1 AGS72920.1 AGS73548.1 AGS73548.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGS67146.1COG0165 Argininosuccinate lyase. (539 aa)
aspACOG1027 Aspartate ammonia-lyase. (469 aa)
AGS68138.1COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (480 aa)
argHCOG0165 Argininosuccinate lyase. (477 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (467 aa)
AGS72920.13-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase. (452 aa)
AGS73548.1COG0165 Argininosuccinate lyase. (539 aa)
Your Current Organism:
Streptomyces collinus
NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365
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