54 items (Streptomyces collinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS66932.1	COG1960 Acyl-CoA dehydrogenases. (402 aa)
	AGS66933.1	COG1960 Acyl-CoA dehydrogenases. (343 aa)
	AGS67031.1	COG1960 Acyl-CoA dehydrogenases. (386 aa)
	AGS67355.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (248 aa)
	AGS67464.1	COG1960 Acyl-CoA dehydrogenases. (390 aa)
	AGS67465.1	COG1960 Acyl-CoA dehydrogenases. (390 aa)
	AGS67545.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
	AGS67769.1	COG0183 Acetyl-CoA acetyltransferase. (388 aa)
	AGS67772.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (266 aa)
	AGS67884.1	COG1960 Acyl-CoA dehydrogenases. (574 aa)
	AGS68199.1	3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
	AGS68259.1	COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (655 aa)
	AGS68416.1	Aminotransferase; COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. (273 aa)
	AGS68574.1	COG1960 Acyl-CoA dehydrogenases. (404 aa)
	AGS68596.1	COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (462 aa)
	AGS68935.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (247 aa)
	AGS68939.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (385 aa)
	AGS69107.1	COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (462 aa)
	AGS69244.1	Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	AGS69257.1	COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (483 aa)
	AGS69271.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
	AGS69349.1	COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. (482 aa)
	AGS69705.1	COG1012 NAD-dependent aldehyde dehydrogenases. (500 aa)
	AGS69745.1	COG1960 Acyl-CoA dehydrogenases. (385 aa)
	AGS69747.1	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). (538 aa)
	AGS69748.1	COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit. (641 aa)
	AGS69749.1	hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases. (313 aa)
	AGS69750.1	COG1960 Acyl-CoA dehydrogenases. (386 aa)
	AGS70020.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
	AGS70098.1	Dehydrogenase; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases. (301 aa)
	AGS70254.1	COG1024 Enoyl-CoA hydratase/carnithine racemase. (245 aa)
	AGS70257.1	COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit. (613 aa)
	AGS70483.1	Valine dehydrogenase (NADP+); COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (365 aa)
	AGS70938.1	COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (486 aa)
	AGS71319.1	COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). (136 aa)
	AGS71383.1	COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit. (526 aa)
	AGS71421.1	COG1012 NAD-dependent aldehyde dehydrogenases. (478 aa)
	AGS71429.1	COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit. (590 aa)
	AGS71434.1	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). (534 aa)
	AGS71872.1	methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases. (146 aa)
	AGS71873.1	Acyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	AGS71887.1	COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit. (566 aa)
	AGS71991.1	COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. (362 aa)
	AGS72130.1	COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
	AGS72342.1	COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit. (724 aa)
	AGS72343.1	COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit. (602 aa)
	AGS72375.1	COG1960 Acyl-CoA dehydrogenases. (377 aa)
	AGS72460.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
	AGS72881.1	NADP oxidoreductase, coenzyme F420-dependent:6-phosphogluconate dehydrogenase, NAD-binding protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases. (311 aa)
	AGS72923.1	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (214 aa)
	AGS72924.1	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (251 aa)
	AGS72945.1	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
	AGS72946.1	Fatty acid oxidative multifunctional enzyme; COG1024 Enoyl-CoA hydratase/carnithine racemase. (727 aa)
	AGS73063.1	COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS66932.1	AGS66933.1	B446_00460	B446_00465	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.967
AGS66932.1	AGS67031.1	B446_00460	B446_00965	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.902
AGS66932.1	AGS67355.1	B446_00460	B446_02615	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777
AGS66932.1	AGS67464.1	B446_00460	B446_03160	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.920
AGS66932.1	AGS67465.1	B446_00460	B446_03165	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.922
AGS66932.1	AGS67769.1	B446_00460	B446_04705	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase.	0.757
AGS66932.1	AGS67772.1	B446_00460	B446_04720	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777
AGS66932.1	AGS67884.1	B446_00460	B446_05290	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.915
AGS66932.1	AGS68199.1	B446_00460	B446_06875	COG1960 Acyl-CoA dehydrogenases.	3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS68574.1	B446_00460	B446_08750	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.911
AGS66932.1	AGS68935.1	B446_00460	B446_10565	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.813
AGS66932.1	AGS68939.1	B446_00460	B446_10585	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69244.1	B446_00460	B446_12110	COG1960 Acyl-CoA dehydrogenases.	Lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69271.1	B446_00460	B446_12245	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS69349.1	B446_00460	B446_12645	COG1960 Acyl-CoA dehydrogenases.	COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.	0.547
AGS66932.1	AGS69745.1	B446_00460	B446_14635	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.920
AGS66932.1	AGS69747.1	B446_00460	B446_14645	COG1960 Acyl-CoA dehydrogenases.	COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).	0.917
AGS66932.1	AGS69750.1	B446_00460	B446_14660	COG1960 Acyl-CoA dehydrogenases.	COG1960 Acyl-CoA dehydrogenases.	0.932
AGS66932.1	AGS70020.1	B446_00460	B446_16010	COG1960 Acyl-CoA dehydrogenases.	COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.757
AGS66932.1	AGS70254.1	B446_00460	B446_17190	COG1960 Acyl-CoA dehydrogenases.	COG1024 Enoyl-CoA hydratase/carnithine racemase.	0.777