STRINGSTRING
AGS67808.1 AGS67808.1 AGS69510.1 AGS69510.1 AGS69511.1 AGS69511.1 AGS69513.1 AGS69513.1 AGS69515.1 AGS69515.1 AGS69516.1 AGS69516.1 AGS69517.1 AGS69517.1 AGS70761.1 AGS70761.1 AGS73354.1 AGS73354.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AGS67808.1Nucleotide-sugar dehydratase; COG0451 Nucleoside-diphosphate-sugar epimerases. (331 aa)
AGS69510.1Glucose-1-phosphate thymidylyltransferase; COG1209 dTDP-glucose pyrophosphorylase. (351 aa)
AGS69511.1COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (330 aa)
AGS69513.1COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes. (197 aa)
AGS69515.1Lipopolysaccharide biosynthesis protein RfbH; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. (433 aa)
AGS69516.1NDP-hexose 23-dehydratase. (497 aa)
AGS69517.1Oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. (325 aa)
AGS70761.1Epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases. (329 aa)
AGS73354.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (192 aa)
Your Current Organism:
Streptomyces collinus
NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365
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