STRINGSTRING
GCA_000730585_00086 GCA_000730585_00086 GCA_000730585_01063 GCA_000730585_01063 GCA_000730585_02361 GCA_000730585_02361 GCA_000730585_03128 GCA_000730585_03128 GCA_000730585_03254 GCA_000730585_03254 GCA_000730585_04729 GCA_000730585_04729 GCA_000730585_04774 GCA_000730585_04774 GCA_000730585_05325 GCA_000730585_05325
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000730585_00086Unannotated protein. (576 aa)
GCA_000730585_01063Unannotated protein. (579 aa)
GCA_000730585_02361Unannotated protein. (487 aa)
GCA_000730585_03128Unannotated protein. (100 aa)
GCA_000730585_03254Unannotated protein. (160 aa)
GCA_000730585_04729Unannotated protein. (523 aa)
GCA_000730585_04774Unannotated protein. (107 aa)
GCA_000730585_05325Unannotated protein. (101 aa)
Your Current Organism:
Pseudomonas japonica
NCBI taxonomy Id: 1215104
Other names: P. japonica NBRC 103040 = DSM 22348, Pseudomonas japonica DSM 22348, Pseudomonas japonica DSM 22348 = NBRC 103040, Pseudomonas japonica IAM 15071, Pseudomonas japonica JCM 21532, Pseudomonas japonica NBRC 103040, Pseudomonas japonica NBRC 103040 = DSM 22348
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