STRINGSTRING
ALV25716.1 ALV25716.1 ALV25718.1 ALV25718.1 ALV25719.1 ALV25719.1 ALV25759.1 ALV25759.1 ALV25760.1 ALV25760.1 ALV25797.1 ALV25797.1 ALV25943.1 ALV25943.1 ALV25945.1 ALV25945.1 ALV25955.1 ALV25955.1 ALV25956.1 ALV25956.1 ALV25969.1 ALV25969.1 ALV26008.1 ALV26008.1 ALV26068.1 ALV26068.1 ALV26069.1 ALV26069.1 ALV26097.1 ALV26097.1 ALV26385.1 ALV26385.1 ALV26557.1 ALV26557.1 ALV26730.1 ALV26730.1 accD accD fabA fabA ALV29903.1 ALV29903.1 fabI_3 fabI_3 acsA acsA ALV26817.1 ALV26817.1 ALV26818.1 ALV26818.1 ALV26819.1 ALV26819.1 ALV26820.1 ALV26820.1 ALV26835.1 ALV26835.1 ALV26889.1 ALV26889.1 ALV26890.1 ALV26890.1 ALV26924.1 ALV26924.1 ALV26942.1 ALV26942.1 ALV26956.1 ALV26956.1 accA accA ALV26987.1 ALV26987.1 ALV29938.1 ALV29938.1 ALV29940.1 ALV29940.1 ALV27019.1 ALV27019.1 ALV27020.1 ALV27020.1 ALV27021.1 ALV27021.1 ALV27022.1 ALV27022.1 ALV27023.1 ALV27023.1 ALV27024.1 ALV27024.1 ALV27025.1 ALV27025.1 ALV27026.1 ALV27026.1 ALV27059.1 ALV27059.1 prpE prpE ALV27665.1 ALV27665.1 ALV27666.1 ALV27666.1 ALV27672.1 ALV27672.1 ALV27673.1 ALV27673.1 ALV27674.1 ALV27674.1 ALV27700.1 ALV27700.1 APZ00_12165 APZ00_12165 ALV27724.1 ALV27724.1 ALV27725.1 ALV27725.1 ALV27852.1 ALV27852.1 ALV27855.1 ALV27855.1 ALV30121.1 ALV30121.1 ALV28326.1 ALV28326.1 ALV30152.1 ALV30152.1 ALV28483.1 ALV28483.1 ALV28492.1 ALV28492.1 ALV28493.1 ALV28493.1 ALV28494.1 ALV28494.1 ALV30163.1 ALV30163.1 ALV28606.1 ALV28606.1 accB_2 accB_2 ALV30187.1 ALV30187.1 ALV28703.1 ALV28703.1 ALV28752.1 ALV28752.1 ALV28753.1 ALV28753.1 ALV28782.1 ALV28782.1 ALV30242.1 ALV30242.1 ALV28907.1 ALV28907.1 fabD fabD ALV29231.1 ALV29231.1 ALV29232.1 ALV29232.1 ALV29247.1 ALV29247.1 ALV29274.1 ALV29274.1 ALV30297.1 ALV30297.1 ALV29377.1 ALV29377.1 fabH fabH plsX plsX ALV29394.1 ALV29394.1 ALV29396.1 ALV29396.1 ALV29397.1 ALV29397.1 ALV30318.1 ALV30318.1 ridA ridA ALV29427.1 ALV29427.1 ALV29428.1 ALV29428.1 ALV29429.1 ALV29429.1 ALV29430.1 ALV29430.1 ALV29431.1 ALV29431.1 ALV29543.1 ALV29543.1 ALV29555.1 ALV29555.1 ALV29625.1 ALV29625.1 ALV29649.1 ALV29649.1 ALV29655.1 ALV29655.1 ALV30348.1 ALV30348.1 ALV29697.1 ALV29697.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV25716.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
ALV25718.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
ALV25719.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (739 aa)
ALV25759.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
ALV25760.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
ALV25797.1Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (558 aa)
ALV25943.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
ALV25945.1enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
ALV25955.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
ALV25956.1succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
ALV25969.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
ALV26008.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (490 aa)
ALV26068.1Biotin attachment protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (80 aa)
ALV26069.1An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ALV26097.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
ALV26385.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
ALV26557.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
ALV26730.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
accDacetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (304 aa)
fabA3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (168 aa)
ALV29903.1FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (404 aa)
fabI_3enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
ALV26817.1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
ALV26818.1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
ALV26819.13-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
ALV26820.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
ALV26835.1malyl-CoA thiolesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (296 aa)
ALV26889.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
ALV26890.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)
ALV26924.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ALV26942.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
ALV26956.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
accAacetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (317 aa)
ALV26987.1Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
ALV29938.1crotonyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
ALV29940.1Protein meaA; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)
ALV27019.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (262 aa)
ALV27020.1hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
ALV27021.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
ALV27022.13-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)
ALV27023.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
ALV27024.1methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
ALV27025.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
ALV27026.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
ALV27059.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (568 aa)
prpEpropionate--CoA ligase; Catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. (638 aa)
ALV27665.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
ALV27666.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
ALV27672.12-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
ALV27673.1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
ALV27674.16-carboxyhexanoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
ALV27700.1CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (397 aa)
APZ00_12165Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
ALV27724.13-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
ALV27725.13-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
ALV27852.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (702 aa)
ALV27855.1acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
ALV30121.1dicarboxylate--CoA ligase PimA; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)
ALV28326.1ArgK protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
ALV30152.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ALV28483.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
ALV28492.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
ALV28493.1acetyl-CoA--acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
ALV28494.1Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
ALV30163.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
ALV28606.1acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa)
accB_2acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (154 aa)
ALV30187.1methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
ALV28703.1Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
ALV28752.1Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
ALV28753.1Omega amino acid--pyruvate aminotransferase; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
ALV28782.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (348 aa)
ALV30242.13-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (420 aa)
ALV28907.13-oxoacyl-ACP synthase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
fabDACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
ALV29231.1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
ALV29232.1Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
ALV29247.1isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
ALV29274.1acetyl/propionyl-CoA carboxylase subuit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
ALV30297.1methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
ALV29377.1MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
fabH3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (325 aa)
plsXPhosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (354 aa)
ALV29394.13-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. (295 aa)
ALV29396.13-hydroxyisobutyryl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
ALV29397.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
ALV30318.12-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
ridAEnamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
ALV29427.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
ALV29428.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
ALV29429.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
ALV29430.13-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
ALV29431.1Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (771 aa)
ALV29543.1Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
ALV29555.1CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family. (392 aa)
ALV29625.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
ALV29649.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
ALV29655.1methylmalonyl-CoA mutase; MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology. (721 aa)
ALV30348.1methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)
ALV29697.1Arginine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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