STRINGSTRING
ALV26903.1 ALV26903.1 ALV27551.1 ALV27551.1 ALV27552.1 ALV27552.1 ALV27554.1 ALV27554.1 ALV27555.1 ALV27555.1 ALV27952.1 ALV27952.1 ALV28429.1 ALV28429.1 ALV30199.1 ALV30199.1 ALV28689.1 ALV28689.1 ALV28690.1 ALV28690.1 ALV28691.1 ALV28691.1 ALV28692.1 ALV28692.1 ALV28693.1 ALV28693.1 ALV28940.1 ALV28940.1 ALV29110.1 ALV29110.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV26903.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (419 aa)
ALV27551.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
ALV27552.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ALV27554.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
ALV27555.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
ALV27952.1Sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
ALV28429.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
ALV30199.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
ALV28689.1Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
ALV28690.13-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
ALV28691.1Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
ALV28692.1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
ALV28693.1iacB; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
ALV28940.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)
ALV29110.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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