STRINGSTRING
ALV25664.1 ALV25664.1 ALV25665.1 ALV25665.1 ALV29771.1 ALV29771.1 ALV26087.1 ALV26087.1 ALV26088.1 ALV26088.1 ALV26089.1 ALV26089.1 ALV26091.1 ALV26091.1 ALV29818.1 ALV29818.1 ALV29819.1 ALV29819.1 ALV26092.1 ALV26092.1 ALV26093.1 ALV26093.1 ALV29820.1 ALV29820.1 ALV27571.1 ALV27571.1 ALV27572.1 ALV27572.1 ALV27573.1 ALV27573.1 ALV27575.1 ALV27575.1 ALV27662.1 ALV27662.1 ALV27726.1 ALV27726.1 ALV30051.1 ALV30051.1 ALV27727.1 ALV27727.1 ALV30052.1 ALV30052.1 ALV30085.1 ALV30085.1 APZ00_15275 APZ00_15275 ALV28285.1 ALV28285.1 ALV28935.1 ALV28935.1 ALV28936.1 ALV28936.1 ALV28937.1 ALV28937.1 ALV29462.1 ALV29462.1 ALV29463.1 ALV29463.1 ALV29464.1 ALV29464.1 ALV29465.1 ALV29465.1 ALV29466.1 ALV29466.1 ALV29467.1 ALV29467.1 ALV29753.1 ALV29753.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV25664.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa)
ALV25665.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (110 aa)
ALV29771.1Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
ALV26087.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
ALV26088.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
ALV26089.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
ALV26091.1Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
ALV29818.12-oxo-hepta-3-ene-1,7-dioate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ALV29819.14-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (253 aa)
ALV26092.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (126 aa)
ALV26093.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
ALV29820.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)
ALV27571.1Intradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
ALV27572.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
ALV27573.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
ALV27575.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
ALV27662.14-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
ALV27726.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
ALV30051.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
ALV27727.1Hydroxyquinol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
ALV30052.1Muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (391 aa)
ALV30085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
APZ00_15275AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
ALV28285.1Hydroxyacid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (255 aa)
ALV28935.1Stress responsive protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
ALV28936.1Maleylacetate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
ALV28937.16-chlorohydroxyquinol-1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
ALV29462.1LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (306 aa)
ALV29463.13-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
ALV29464.14-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)
ALV29465.1Protocatechuate 3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
ALV29466.1Protocatechuate 3,4-dioxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
ALV29467.1Fumarate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
ALV29753.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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