STRINGSTRING
ALV25664.1 ALV25664.1 ALV25665.1 ALV25665.1 ALV26087.1 ALV26087.1 ALV26088.1 ALV26088.1 ALV26089.1 ALV26089.1 ALV29818.1 ALV29818.1 ALV29819.1 ALV29819.1 ALV26092.1 ALV26092.1 ALV26093.1 ALV26093.1 ALV29820.1 ALV29820.1 ALV28285.1 ALV28285.1 ALV29753.1 ALV29753.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV25664.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (116 aa)
ALV25665.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (110 aa)
ALV26087.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
ALV26088.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
ALV26089.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
ALV29818.12-oxo-hepta-3-ene-1,7-dioate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ALV29819.14-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (253 aa)
ALV26092.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (126 aa)
ALV26093.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
ALV29820.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)
ALV28285.1Hydroxyacid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (255 aa)
ALV29753.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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