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trpA trpA ALV26752.1 ALV26752.1 ALV26659.1 ALV26659.1 ALV26657.1 ALV26657.1 ALV26259.1 ALV26259.1 kynU kynU nbaC nbaC ALV30310.1 ALV30310.1 ALV28058.1 ALV28058.1 ALV27771.1 ALV27771.1 ALV30019.1 ALV30019.1 ALV29072.1 ALV29072.1 ALV30233.1 ALV30233.1 ALV30232.1 ALV30232.1 trpD trpD ALV29120.1 ALV29120.1 kynB kynB kynA kynA trpC trpC ALV28315.1 ALV28315.1 ALV28248.1 ALV28248.1 ALV28059.1 ALV28059.1 ALV29709.1 ALV29709.1 trpF trpF trpB trpB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (275 aa)
ALV26752.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
ALV26659.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
ALV26657.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
ALV26259.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (409 aa)
nbaC3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate. (180 aa)
ALV30310.1Class A beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
ALV28058.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
ALV27771.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
ALV30019.1Tyramine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)
ALV29072.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
ALV30233.1Carboxynorspermidine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
ALV30232.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (337 aa)
ALV29120.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
kynBKynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. (211 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (280 aa)
trpCIndole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. (266 aa)
ALV28315.1Usg family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
ALV28248.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
ALV28059.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
ALV29709.1Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (376 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family. (219 aa)
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (401 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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