Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALV25668.1 | uxaC | APZ00_00080 | APZ00_04345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.888 |
| ALV25719.1 | ALV26764.1 | APZ00_00370 | APZ00_06430 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.457 |
| ALV25719.1 | ALV26987.1 | APZ00_00370 | APZ00_07775 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.570 |
| ALV25719.1 | ALV27020.1 | APZ00_00370 | APZ00_08000 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
| ALV25719.1 | ALV27205.1 | APZ00_00370 | APZ00_09140 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| ALV25719.1 | ALV27665.1 | APZ00_00370 | APZ00_11825 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| ALV25719.1 | ALV27852.1 | APZ00_00370 | APZ00_12895 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| ALV25719.1 | ALV29394.1 | APZ00_00370 | APZ00_22065 | 3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. | 0.930 |
| ALV25817.1 | ALV26862.1 | APZ00_00910 | APZ00_07010 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.838 |
| ALV25817.1 | ALV26944.1 | APZ00_00910 | APZ00_07515 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.921 |
| ALV25817.1 | ALV28028.1 | APZ00_00910 | APZ00_13925 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| ALV25817.1 | ALV28462.1 | APZ00_00910 | APZ00_16465 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| ALV25817.1 | ALV29224.1 | APZ00_00910 | APZ00_21020 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| ALV25817.1 | ALV29467.1 | APZ00_00910 | APZ00_22495 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.592 |
| ALV25817.1 | gcvH | APZ00_00910 | APZ00_00925 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
| ALV25817.1 | gcvPA | APZ00_00910 | APZ00_00915 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| ALV25817.1 | gcvT | APZ00_00910 | APZ00_00930 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| ALV25817.1 | hutH | APZ00_00910 | APZ00_19995 | Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| ALV26259.1 | ALV29120.1 | APZ00_03550 | APZ00_20440 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.481 |
| ALV26259.1 | ALV30164.1 | APZ00_03550 | APZ00_16675 | Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-keto-5-aminohexanoate cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.857 |
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