STRINGSTRING
ALV27119.1 ALV27119.1 ALV27332.1 ALV27332.1 ALV27338.1 ALV27338.1 ALV27339.1 ALV27339.1 ALV27343.1 ALV27343.1 ALV27814.1 ALV27814.1 ALV28595.1 ALV28595.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALV27119.1NAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
ALV27332.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
ALV27338.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
ALV27339.1Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
ALV27343.1Inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
ALV27814.1Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
ALV28595.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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