STRINGSTRING
ureC ureC hutI hutI ALV28977.1 ALV28977.1 ade-2 ade-2 ALV28749.1 ALV28749.1 ALV28449.1 ALV28449.1 ALV28054.1 ALV28054.1 ALV27787.1 ALV27787.1 ALV27175.1 ALV27175.1 ALV27170.1 ALV27170.1 ALV27038.1 ALV27038.1 ALV26894.1 ALV26894.1 ade ade ALV25788.1 ALV25788.1 ALV29185.1 ALV29185.1 ALV29051.1 ALV29051.1 ALV29044.1 ALV29044.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ureCUrease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
hutIImidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
ALV28977.1Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
ade-2Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. (601 aa)
ALV28749.1Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (485 aa)
ALV28449.1Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (440 aa)
ALV28054.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
ALV27787.1Cytosine deaminase; Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
ALV27175.1Cytosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (450 aa)
ALV27170.18-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
ALV27038.1Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
ALV26894.1Dihydroorotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
adeAdenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. (600 aa)
ALV25788.1Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
ALV29185.1N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
ALV29051.1Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
ALV29044.1N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
Your Current Organism:
Pannonibacter phragmitetus
NCBI taxonomy Id: 121719
Other names: Achromobacter group B, Achromobacter group E, Achromobacter sp. LMG 5410, Achromobacter sp. LMG 5411, Achromobacter sp. LMG 5430, Achromobacter sp. LMG 5431, DSM 14782, LMG 22736, LMG:22736, NCAIM B02025, NCTC 13350, P. phragmitetus, Pannonibacter phragmitetus Borsodi et al. 2003, alpha proteobacterium C6-19, alpha proteobacterium C6/17, alpha proteobacterium C6/8, strain C6/19
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