16 items (Acinetobacter sp. NIPH3623) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENX40651.1	Type II secretion system protein G. (192 aa)
	ENX40155.1	Hypothetical protein; Belongs to the N-Me-Phe pilin family. (161 aa)
	ENX40157.1	Hypothetical protein. (137 aa)
	ENX40167.1	Hypothetical protein. (177 aa)
	ENX40168.1	Type IV pilus modification protein PilV. (187 aa)
	ENX40169.1	Hypothetical protein. (328 aa)
	ENX40172.1	Hypothetical protein. (175 aa)
	ENX40173.1	Hypothetical protein. (152 aa)
	ENX40174.1	Hypothetical protein. (167 aa)
	ENX40175.1	Type IV pilus modification protein PilV. (161 aa)
	ENX40176.1	Hypothetical protein. (342 aa)
	ENX40179.1	Hypothetical protein. (166 aa)
	ENX37108.1	Type II secretion system protein J. (205 aa)
	ENX37109.1	Type II secretion system protein I. (193 aa)
	ENX37110.1	Hypothetical protein. (182 aa)
	ENX35683.1	Hypothetical protein. (171 aa)

Your Current Organism:

Acinetobacter sp. NIPH3623

NCBI taxonomy Id: 1217698
Other names: A. sp. NIPH 3623, Acinetobacter sp. NIPH 3623

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENX35683.1	ENX40168.1	F888_03516	F888_00815	Hypothetical protein.	Type IV pilus modification protein PilV.	0.522
ENX35683.1	ENX40169.1	F888_03516	F888_00816	Hypothetical protein.	Hypothetical protein.	0.480
ENX35683.1	ENX40173.1	F888_03516	F888_00820	Hypothetical protein.	Hypothetical protein.	0.505
ENX35683.1	ENX40175.1	F888_03516	F888_00822	Hypothetical protein.	Type IV pilus modification protein PilV.	0.474
ENX35683.1	ENX40176.1	F888_03516	F888_00823	Hypothetical protein.	Hypothetical protein.	0.409
ENX35683.1	ENX40179.1	F888_03516	F888_00826	Hypothetical protein.	Hypothetical protein.	0.446
ENX37108.1	ENX37109.1	F888_02444	F888_02445	Type II secretion system protein J.	Type II secretion system protein I.	0.999
ENX37108.1	ENX37110.1	F888_02444	F888_02446	Type II secretion system protein J.	Hypothetical protein.	0.975
ENX37108.1	ENX40173.1	F888_02444	F888_00820	Type II secretion system protein J.	Hypothetical protein.	0.760
ENX37108.1	ENX40651.1	F888_02444	F888_00123	Type II secretion system protein J.	Type II secretion system protein G.	0.868
ENX37109.1	ENX37108.1	F888_02445	F888_02444	Type II secretion system protein I.	Type II secretion system protein J.	0.999
ENX37109.1	ENX37110.1	F888_02445	F888_02446	Type II secretion system protein I.	Hypothetical protein.	0.910
ENX37109.1	ENX40651.1	F888_02445	F888_00123	Type II secretion system protein I.	Type II secretion system protein G.	0.623
ENX37110.1	ENX37108.1	F888_02446	F888_02444	Hypothetical protein.	Type II secretion system protein J.	0.975
ENX37110.1	ENX37109.1	F888_02446	F888_02445	Hypothetical protein.	Type II secretion system protein I.	0.910
ENX37110.1	ENX40651.1	F888_02446	F888_00123	Hypothetical protein.	Type II secretion system protein G.	0.962
ENX40155.1	ENX40172.1	F888_00802	F888_00819	Hypothetical protein; Belongs to the N-Me-Phe pilin family.	Hypothetical protein.	0.431
ENX40155.1	ENX40173.1	F888_00802	F888_00820	Hypothetical protein; Belongs to the N-Me-Phe pilin family.	Hypothetical protein.	0.476
ENX40155.1	ENX40179.1	F888_00802	F888_00826	Hypothetical protein; Belongs to the N-Me-Phe pilin family.	Hypothetical protein.	0.442
ENX40157.1	ENX40172.1	F888_00804	F888_00819	Hypothetical protein.	Hypothetical protein.	0.779