(5 nodes) PAS-associated, C-terminal, and HPT domain superfamily network (Klebsiella pneumoniae ozaenae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gmr	Unannotated protein. (551 aa)
	rcsC	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. (945 aa)
	arcB	Unannotated protein. (779 aa)
	barA	Unannotated protein. (916 aa)
	GCA_001598715_01918	Unannotated protein. (761 aa)

Your Current Organism:

Klebsiella pneumoniae ozaenae

NCBI taxonomy Id: 1218098
Other names: K. pneumoniae subsp. ozaenae NBRC 105683, Klebsiella pneumoniae subsp. ozaenae NBRC 105683

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GCA_001598715_01918	arcB	GCA_001598715_01918	GCA_001598715_01084	Unannotated protein.	Unannotated protein.	0.999
GCA_001598715_01918	barA	GCA_001598715_01918	GCA_001598715_01721	Unannotated protein.	Unannotated protein.	0.986
GCA_001598715_01918	gmr	GCA_001598715_01918	GCA_001598715_00454	Unannotated protein.	Unannotated protein.	0.852
GCA_001598715_01918	rcsC	GCA_001598715_01918	GCA_001598715_00625	Unannotated protein.	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.931
arcB	GCA_001598715_01918	GCA_001598715_01084	GCA_001598715_01918	Unannotated protein.	Unannotated protein.	0.999
arcB	barA	GCA_001598715_01084	GCA_001598715_01721	Unannotated protein.	Unannotated protein.	0.999
arcB	gmr	GCA_001598715_01084	GCA_001598715_00454	Unannotated protein.	Unannotated protein.	0.993
arcB	rcsC	GCA_001598715_01084	GCA_001598715_00625	Unannotated protein.	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.999
barA	GCA_001598715_01918	GCA_001598715_01721	GCA_001598715_01918	Unannotated protein.	Unannotated protein.	0.986
barA	arcB	GCA_001598715_01721	GCA_001598715_01084	Unannotated protein.	Unannotated protein.	0.999
barA	gmr	GCA_001598715_01721	GCA_001598715_00454	Unannotated protein.	Unannotated protein.	0.973
barA	rcsC	GCA_001598715_01721	GCA_001598715_00625	Unannotated protein.	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.988
gmr	GCA_001598715_01918	GCA_001598715_00454	GCA_001598715_01918	Unannotated protein.	Unannotated protein.	0.852
gmr	arcB	GCA_001598715_00454	GCA_001598715_01084	Unannotated protein.	Unannotated protein.	0.993
gmr	barA	GCA_001598715_00454	GCA_001598715_01721	Unannotated protein.	Unannotated protein.	0.973
gmr	rcsC	GCA_001598715_00454	GCA_001598715_00625	Unannotated protein.	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	0.908
rcsC	GCA_001598715_01918	GCA_001598715_00625	GCA_001598715_01918	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	Unannotated protein.	0.931
rcsC	arcB	GCA_001598715_00625	GCA_001598715_01084	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	Unannotated protein.	0.999
rcsC	barA	GCA_001598715_00625	GCA_001598715_01721	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	Unannotated protein.	0.988
rcsC	gmr	GCA_001598715_00625	GCA_001598715_00454	Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.	Unannotated protein.	0.908