34 items (Diaphorina citri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103511731	Probable RNA helicase armi. (826 aa)
	LOC103514700	Protein LSM14 homolog A. (397 aa)
	LOC103517033	Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family. (383 aa)
	LOC103518108	Uncharacterized protein LOC103518108. (159 aa)
	LOC103519994	Probable RNA helicase armi. (183 aa)
	LOC103521362	Cytoplasmic polyadenylation element-binding protein 1-like. (520 aa)
	LOC103520689	Importin subunit beta-like. (151 aa)
	LOC103522271	Eukaryotic initiation factor 4A-I-like. (133 aa)
	LOC103523447	Methylosome protein 50-like. (78 aa)
	LOC108252015	Methylosome protein 50. (342 aa)
	LOC103507676	Small nuclear ribonucleoprotein G. (66 aa)
	LOC103514632	Tudor domain-containing protein 1-like. (471 aa)
	LOC103518046	Uncharacterized protein LOC103518046. (683 aa)
	LOC113465407	Transitional endoplasmic reticulum ATPase-like. (291 aa)
	LOC103524570	Fragile X mental retardation syndrome-related protein 1. (514 aa)
	LOC103525056	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4. (5664 aa)
	LOC103505297	Tudor domain-containing protein 5-like. (225 aa)
	LOC103506208	Uncharacterized protein LOC103506208. (2501 aa)
	LOC103505289	Tudor domain-containing protein 7. (968 aa)
	LOC103508176	ATP-dependent RNA helicase bel. (112 aa)
	LOC103510136	ATP-dependent RNA helicase bel. (303 aa)
	LOC103511375	CUGBP Elav-like family member 2. (409 aa)
	LOC103514066	Importin subunit beta-like. (654 aa)
	LOC103514654	Eukaryotic initiation factor 4A-II-like; Belongs to the DEAD box helicase family. (302 aa)
	LOC113469552	Uncharacterized protein LOC113469552. (299 aa)
	LOC103516853	Heterogeneous nuclear ribonucleoprotein 27C. (330 aa)
	LOC103515324	ATP-dependent RNA helicase bel; Belongs to the DEAD box helicase family. (430 aa)
	LOC103517615	Maternal protein tudor-like. (1194 aa)
	LOC103518733	Transitional endoplasmic reticulum ATPase TER94-like; Belongs to the AAA ATPase family. (367 aa)
	LOC103517036	Putative ATP-dependent RNA helicase me31b. (136 aa)
	LOC103521355	Cytoplasmic polyadenylation element-binding protein 1-like. (470 aa)
	LOC103522088	Transitional endoplasmic reticulum ATPase-like. (228 aa)
	LOC103520690	Importin subunit beta-1-like. (129 aa)
	LOC113472228	Uncharacterized protein LOC113472228. (478 aa)

Your Current Organism:

Diaphorina citri

NCBI taxonomy Id: 121845
Other names: Asian citrus psyllid, D. citri

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103505289	LOC103506208	A0A3Q0IQ40	A0A3Q0ILI8	Tudor domain-containing protein 7.	Uncharacterized protein LOC103506208.	0.488
LOC103505289	LOC103508176	A0A3Q0IQ40	A0A3Q0IQR8	Tudor domain-containing protein 7.	ATP-dependent RNA helicase bel.	0.419
LOC103505289	LOC103510136	A0A3Q0IQ40	A0A3Q0IUZ6	Tudor domain-containing protein 7.	ATP-dependent RNA helicase bel.	0.419
LOC103505289	LOC103511731	A0A3Q0IQ40	A0A3Q0J3A3	Tudor domain-containing protein 7.	Probable RNA helicase armi.	0.559
LOC103505289	LOC103515324	A0A3Q0IQ40	A0A3Q0JA85	Tudor domain-containing protein 7.	ATP-dependent RNA helicase bel; Belongs to the DEAD box helicase family.	0.419
LOC103505289	LOC103519994	A0A3Q0IQ40	A0A1S3DLA5	Tudor domain-containing protein 7.	Probable RNA helicase armi.	0.559
LOC103505297	LOC103506208	A0A3Q0IJN1	A0A3Q0ILI8	Tudor domain-containing protein 5-like.	Uncharacterized protein LOC103506208.	0.488
LOC103505297	LOC103508176	A0A3Q0IJN1	A0A3Q0IQR8	Tudor domain-containing protein 5-like.	ATP-dependent RNA helicase bel.	0.445
LOC103505297	LOC103510136	A0A3Q0IJN1	A0A3Q0IUZ6	Tudor domain-containing protein 5-like.	ATP-dependent RNA helicase bel.	0.445
LOC103505297	LOC103511731	A0A3Q0IJN1	A0A3Q0J3A3	Tudor domain-containing protein 5-like.	Probable RNA helicase armi.	0.694
LOC103505297	LOC103515324	A0A3Q0IJN1	A0A3Q0JA85	Tudor domain-containing protein 5-like.	ATP-dependent RNA helicase bel; Belongs to the DEAD box helicase family.	0.445
LOC103505297	LOC103519994	A0A3Q0IJN1	A0A1S3DLA5	Tudor domain-containing protein 5-like.	Probable RNA helicase armi.	0.694
LOC103505297	LOC113469552	A0A3Q0IJN1	A0A3Q0J8W3	Tudor domain-containing protein 5-like.	Uncharacterized protein LOC113469552.	0.433
LOC103506208	LOC103505289	A0A3Q0ILI8	A0A3Q0IQ40	Uncharacterized protein LOC103506208.	Tudor domain-containing protein 7.	0.488
LOC103506208	LOC103505297	A0A3Q0ILI8	A0A3Q0IJN1	Uncharacterized protein LOC103506208.	Tudor domain-containing protein 5-like.	0.488
LOC103506208	LOC103508176	A0A3Q0ILI8	A0A3Q0IQR8	Uncharacterized protein LOC103506208.	ATP-dependent RNA helicase bel.	0.542
LOC103506208	LOC103510136	A0A3Q0ILI8	A0A3Q0IUZ6	Uncharacterized protein LOC103506208.	ATP-dependent RNA helicase bel.	0.542
LOC103506208	LOC103514632	A0A3Q0ILI8	A0A1S4EI01	Uncharacterized protein LOC103506208.	Tudor domain-containing protein 1-like.	0.488
LOC103506208	LOC103515324	A0A3Q0ILI8	A0A3Q0JA85	Uncharacterized protein LOC103506208.	ATP-dependent RNA helicase bel; Belongs to the DEAD box helicase family.	0.542
LOC103506208	LOC103517033	A0A3Q0ILI8	A0A1S3DEQ5	Uncharacterized protein LOC103506208.	Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.	0.540