STRINGSTRING
A1Q2_07744 A1Q2_07744 A1Q2_08357 A1Q2_08357 A1Q2_08159 A1Q2_08159 A1Q2_07671 A1Q2_07671 A1Q2_05930 A1Q2_05930 A1Q2_05849 A1Q2_05849 A1Q2_07914 A1Q2_07914 A1Q2_07848 A1Q2_07848 A1Q2_07616 A1Q2_07616 A1Q2_04327 A1Q2_04327 A1Q2_07309 A1Q2_07309 A1Q2_07424 A1Q2_07424 A1Q2_07197 A1Q2_07197 A1Q2_03868 A1Q2_03868 A1Q2_03695 A1Q2_03695 A1Q2_06674 A1Q2_06674 A1Q2_03482 A1Q2_03482 A1Q2_03582 A1Q2_03582 A1Q2_03460 A1Q2_03460 A1Q2_03412 A1Q2_03412 A1Q2_06544 A1Q2_06544 A1Q2_08042 A1Q2_08042 A1Q2_02920 A1Q2_02920 A1Q2_07768 A1Q2_07768 A1Q2_05830 A1Q2_05830 A1Q2_07249 A1Q2_07249 A1Q2_06857 A1Q2_06857 LSM4 LSM4 A1Q2_01674 A1Q2_01674 A1Q2_06775 A1Q2_06775 A1Q2_04918 A1Q2_04918 A1Q2_04928 A1Q2_04928 A1Q2_06481 A1Q2_06481 LSM1 LSM1 A1Q2_06122 A1Q2_06122 A1Q2_05816 A1Q2_05816 A1Q2_00864 A1Q2_00864 A1Q2_08254 A1Q2_08254 A1Q2_04203 A1Q2_04203 A1Q2_04208 A1Q2_04208 A1Q2_08162 A1Q2_08162 A1Q2_08071 A1Q2_08071 A1Q2_05254 A1Q2_05254 A1Q2_03894 A1Q2_03894 A1Q2_00236 A1Q2_00236 A1Q2_05042 A1Q2_05042 A1Q2_07476 A1Q2_07476 PAN2 PAN2 A1Q2_03387 A1Q2_03387 FEN1 FEN1 A1Q2_04335 A1Q2_04335 A1Q2_03072 A1Q2_03072 A1Q2_04018 A1Q2_04018 PAN3 PAN3 A1Q2_03697 A1Q2_03697 BNA4 BNA4 A1Q2_02630 A1Q2_02630 A1Q2_03484 A1Q2_03484 A1Q2_02341 A1Q2_02341 BNA5 BNA5 A1Q2_02887 A1Q2_02887 A1Q2_01854 A1Q2_01854 A1Q2_01899 A1Q2_01899 A1Q2_01546 A1Q2_01546 A1Q2_05312 A1Q2_05312 A1Q2_02352 A1Q2_02352 A1Q2_02264 A1Q2_02264 A1Q2_01014 A1Q2_01014 A1Q2_04561 A1Q2_04561 A1Q2_01855 A1Q2_01855 A1Q2_00787 A1Q2_00787 A1Q2_01456 A1Q2_01456 A1Q2_00292 A1Q2_00292 A1Q2_00783 A1Q2_00783 A1Q2_03480 A1Q2_03480 A1Q2_03510 A1Q2_03510 A1Q2_03575 A1Q2_03575 A1Q2_03389 A1Q2_03389 A1Q2_03357 A1Q2_03357 A1Q2_00492 A1Q2_00492 A1Q2_00502 A1Q2_00502 A1Q2_00213 A1Q2_00213 A1Q2_00258 A1Q2_00258 A1Q2_00263 A1Q2_00263 A1Q2_02883 A1Q2_02883 A1Q2_02812 A1Q2_02812 A1Q2_02744 A1Q2_02744 A1Q2_02725 A1Q2_02725 A1Q2_02655 A1Q2_02655 A1Q2_02504 A1Q2_02504 A1Q2_01641 A1Q2_01641 A1Q2_01608 A1Q2_01608 A1Q2_08116 A1Q2_08116 A1Q2_00854 A1Q2_00854 A1Q2_07957 A1Q2_07957 A1Q2_07725 A1Q2_07725 A1Q2_07129 A1Q2_07129 A1Q2_00055 A1Q2_00055 A1Q2_06844 A1Q2_06844 A1Q2_05471 A1Q2_05471 A1Q2_05134 A1Q2_05134 A1Q2_04986 A1Q2_04986 A1Q2_04175 A1Q2_04175 A1Q2_04035 A1Q2_04035 A1Q2_03806 A1Q2_03806 A1Q2_03694 A1Q2_03694 A1Q2_03699 A1Q2_03699 A1Q2_03380 A1Q2_03380 A1Q2_03326 A1Q2_03326 A1Q2_02798 A1Q2_02798 A1Q2_02505 A1Q2_02505 A1Q2_01792 A1Q2_01792 A1Q2_01882 A1Q2_01882 A1Q2_01629 A1Q2_01629 A1Q2_01463 A1Q2_01463 A1Q2_00920 A1Q2_00920 A1Q2_00545 A1Q2_00545
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1Q2_07744RNA helicase like protein. (700 aa)
A1Q2_08357RNase_PH domain-containing protein. (280 aa)
A1Q2_08159HD_domain domain-containing protein. (291 aa)
A1Q2_07671Uncharacterized protein. (990 aa)
A1Q2_05930Protein-nucleus import-related protein. (238 aa)
A1Q2_05849Polynucleotide adenylyltransferase. (573 aa)
A1Q2_07914Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (308 aa)
A1Q2_07848Smr domain-containing protein. (635 aa)
A1Q2_07616Cytoplasm protein. (259 aa)
A1Q2_04327dUTPase domain-containing protein. (202 aa)
A1Q2_07309Uncharacterized protein. (238 aa)
A1Q2_074243'-to-5' phosphorolytic exoribonuclease, Ski6p. (254 aa)
A1Q2_07197Uncharacterized protein. (1065 aa)
A1Q2_03868SAP domain-containing protein. (837 aa)
A1Q2_03695HBS1_N domain-containing protein. (491 aa)
A1Q2_06674NTP_transf_9 domain-containing protein. (133 aa)
A1Q2_03482DBR1 domain-containing protein. (460 aa)
A1Q2_03582Cytidine deaminase. (103 aa)
A1Q2_03460Tryptophan 2,3-dioxygenase. (513 aa)
A1Q2_034123-hydroxyanthranilate 3,4-dioxygenase. (200 aa)
A1Q2_06544Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (300 aa)
A1Q2_08042NAD+ diphosphatase. (457 aa)
A1Q2_02920Cap binding protein; Belongs to the eukaryotic initiation factor 4E family. (531 aa)
A1Q2_07768Nucleolar exosome component, involved in rRNA processing and RNA degradation, Dis3p; Belongs to the RNR ribonuclease family. (815 aa)
A1Q2_05830Uncharacterized protein. (1018 aa)
A1Q2_07249A_deaminase domain-containing protein. (304 aa)
A1Q2_06857S1 CSL4 protein. (158 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (154 aa)
A1Q2_01674DNA polymerase delta, small subunit. (617 aa)
A1Q2_06775Ubiquitin fusion-degradation 1-like protein. (459 aa)
A1Q2_04918Exosome complex exonuclease rrp4. (277 aa)
A1Q2_04928Component of the CCR4-NOT transcriptional complex, Ccr4p. (788 aa)
A1Q2_06481Ribonuclease H. (330 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (113 aa)
A1Q2_06122Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. (314 aa)
A1Q2_05816Nuclear cap-binding protein subunit 2. (154 aa)
A1Q2_00864Zn(2)-C6 fungal-type domain-containing protein. (974 aa)
A1Q2_08254Allantoinase. (336 aa)
A1Q2_04203Hydrolase. (458 aa)
A1Q2_04208Uncharacterized protein. (513 aa)
A1Q2_08162Uncharacterized protein. (650 aa)
A1Q2_08071Allantoicase. (747 aa)
A1Q2_05254Ccr4-not transcription complex, subunit 7. (311 aa)
A1Q2_03894Putative exosome complex exonuclease 1. (160 aa)
A1Q2_00236Uncharacterized protein. (590 aa)
A1Q2_05042Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (230 aa)
A1Q2_07476Velvet domain-containing protein. (1418 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1213 aa)
A1Q2_03387Uncharacterized protein. (1045 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (344 aa)
A1Q2_04335Transcriptional repressor. (791 aa)
A1Q2_03072RNase_PH domain-containing protein. (300 aa)
A1Q2_04018Histone H2A; Belongs to the histone H2A family. (149 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (624 aa)
A1Q2_03697RNA binding protein Pumilio. (711 aa)
BNA4Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. (497 aa)
A1Q2_02630Uncharacterized protein. (301 aa)
A1Q2_03484IU_nuc_hydro domain-containing protein. (335 aa)
A1Q2_02341Ubiquitin-protein ligase; Belongs to the cullin family. (812 aa)
BNA5Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (492 aa)
A1Q2_028873'-5' exonuclease domain-containing protein. (906 aa)
A1Q2_01854Nudix hydrolase domain-containing protein. (207 aa)
A1Q2_01899Uncharacterized protein. (622 aa)
A1Q2_01546Uncharacterized protein. (855 aa)
A1Q2_0531226S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (402 aa)
A1Q2_02352Uncharacterized protein. (710 aa)
A1Q2_02264ER-associated protein catabolism-related protein. (641 aa)
A1Q2_010143'-5' exoribonuclease. (2252 aa)
A1Q2_04561Uncharacterized protein. (384 aa)
A1Q2_01855Uncharacterized protein. (414 aa)
A1Q2_00787Exosome complex exonuclease rrp45. (490 aa)
A1Q2_01456Enzyme regulator. (305 aa)
A1Q2_00292HIT domain-containing protein. (184 aa)
A1Q2_00783RPOL4c domain-containing protein. (152 aa)
A1Q2_03480Inosine-uridine preferring nucleoside hydrolase. (316 aa)
A1Q2_03510RRM_2 domain-containing protein. (631 aa)
A1Q2_03575DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1780 aa)
A1Q2_03389Uncharacterized protein; Belongs to the DEAD box helicase family. (437 aa)
A1Q2_03357mRNA-nucleus export-related protein. (637 aa)
A1Q2_00492DBR1 domain-containing protein. (409 aa)
A1Q2_00502Nudix hydrolase domain-containing protein. (485 aa)
A1Q2_00213HD domain-containing protein. (367 aa)
A1Q2_00258Deadenylation-dependent decapping-related protein. (770 aa)
A1Q2_002635'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1568 aa)
A1Q2_02883Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (186 aa)
A1Q2_02812Regulation of transcription from Pol II promoter-related protein. (391 aa)
A1Q2_02744Non-translatable mRNA-binding protein. (381 aa)
A1Q2_02725Uncharacterized protein. (339 aa)
A1Q2_02655Uncharacterized protein. (495 aa)
A1Q2_02504Cytosolic small ribosomal subunit protein. (900 aa)
A1Q2_01641Endonuclease. (373 aa)
A1Q2_01608RNA helicase. (773 aa)
A1Q2_08116RNA binding protein. (697 aa)
A1Q2_00854Transcription factor. (852 aa)
A1Q2_07957RNase III domain-containing protein. (391 aa)
A1Q2_07725S1 motif domain-containing protein. (171 aa)
A1Q2_07129Uncharacterized protein. (1201 aa)
A1Q2_00055Uncharacterized protein. (182 aa)
A1Q2_06844Uncharacterized protein. (1000 aa)
A1Q2_05471PINc domain-containing protein. (1103 aa)
A1Q2_05134Nudix hydrolase domain-containing protein. (353 aa)
A1Q2_04986Uncharacterized protein. (379 aa)
A1Q2_04175Hydrolase. (402 aa)
A1Q2_04035WD_REPEATS_REGION domain-containing protein. (478 aa)
A1Q2_03806Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
A1Q2_03694Elongation factor 1 alpha-like protein. (508 aa)
A1Q2_03699Guanosine-diphosphatase; Belongs to the GDA1/CD39 NTPase family. (681 aa)
A1Q2_03380Translation release factor. (746 aa)
A1Q2_03326Uncharacterized protein. (387 aa)
A1Q2_02798Heme oxygenase 2. (436 aa)
A1Q2_02505Cytosolic small ribosomal subunit protein. (186 aa)
A1Q2_01792Nucleoside diphosphatase; Belongs to the GDA1/CD39 NTPase family. (1148 aa)
A1Q2_01882Uncharacterized protein. (974 aa)
A1Q2_01629Phosphodiesterase. (1103 aa)
A1Q2_01463RNase_PH domain-containing protein. (312 aa)
A1Q2_00920Strand exchange protein (5'-3' exoribonuclease). (1632 aa)
A1Q2_00545Smg4_UPF3 domain-containing protein. (375 aa)
Your Current Organism:
Trichosporon asahii
NCBI taxonomy Id: 1220162
Other names: T. asahii var. asahii CBS 8904, Trichosporon asahii var. asahii CBS 8904
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