STRINGSTRING
A1Q2_03147 A1Q2_03147 A1Q2_05881 A1Q2_05881 A1Q2_02796 A1Q2_02796 MEF1 MEF1 TSF1 TSF1 A1Q2_01334 A1Q2_01334 A1Q2_04777 A1Q2_04777 A1Q2_03531 A1Q2_03531 A1Q2_03694 A1Q2_03694 A1Q2_07320 A1Q2_07320 A1Q2_01898 A1Q2_01898 A1Q2_08053 A1Q2_08053 A1Q2_04424 A1Q2_04424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A1Q2_03147Pol II transcription elongation factor. (423 aa)
A1Q2_05881Translation elongation factor 2. (1099 aa)
A1Q2_02796Positive transcription elongation factor. (317 aa)
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (787 aa)
TSF1Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (349 aa)
A1Q2_01334Elongation factor 1-beta (Ef-1-beta); Belongs to the EF-1-beta/EF-1-delta family. (221 aa)
A1Q2_04777Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (463 aa)
A1Q2_03531Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (553 aa)
A1Q2_03694Elongation factor 1 alpha-like protein. (508 aa)
A1Q2_07320Elongation factor 3. (1049 aa)
A1Q2_01898Pol II transcription elongation factor. (1147 aa)
A1Q2_08053Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (467 aa)
A1Q2_04424Uncharacterized protein. (426 aa)
Your Current Organism:
Trichosporon asahii
NCBI taxonomy Id: 1220162
Other names: T. asahii var. asahii CBS 8904, Trichosporon asahii var. asahii CBS 8904
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