18 items (Trichosporon asahii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A1Q2_00697	Uncharacterized protein. (331 aa)
	A1Q2_02126	Uncharacterized protein. (361 aa)
	A1Q2_02196	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (195 aa)
	A1Q2_04104	Type 2C Protein Phosphatase. (352 aa)
	A1Q2_03727	Uncharacterized protein. (257 aa)
	A1Q2_04294	Pyruvate dehydrogenase protein x component. (294 aa)
	A1Q2_07519	Hydroxyacylglutathione hydrolase. (237 aa)
	A1Q2_07885	Protein-serine/threonine kinase. (356 aa)
	A1Q2_02935	Lactamase_B domain-containing protein. (387 aa)
	A1Q2_06470	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (401 aa)
	A1Q2_03627	Uncharacterized protein. (303 aa)
	A1Q2_06856	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (484 aa)
	A1Q2_03764	Dihydrolipoyl dehydrogenase. (550 aa)
	A1Q2_05523	Voltage-dependent ion-selective channel. (292 aa)
	A1Q2_07473	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (417 aa)
	A1Q2_03922	Uncharacterized protein. (303 aa)
	A1Q2_05097	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family. (120 aa)
	A1Q2_07005	Uncharacterized protein; Belongs to the GST superfamily. (231 aa)

Your Current Organism:

Trichosporon asahii

NCBI taxonomy Id: 1220162
Other names: T. asahii var. asahii CBS 8904, Trichosporon asahii var. asahii CBS 8904

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A1Q2_02196	A1Q2_05097	K1W3K8	K1WGK5	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria. Belongs to the mitochondrial pyruvate carrier (MPC) (TC 2.A.105) family.	0.973
A1Q2_03727	A1Q2_03764	K1VRC1	K1VD81	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.660
A1Q2_03727	A1Q2_04294	K1VRC1	K1VPQ2	Uncharacterized protein.	Pyruvate dehydrogenase protein x component.	0.574
A1Q2_03727	A1Q2_06470	K1VRC1	K1VEK5	Uncharacterized protein.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.813
A1Q2_03727	A1Q2_06856	K1VRC1	K1VDG1	Uncharacterized protein.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.574
A1Q2_03727	A1Q2_07473	K1VRC1	K1V2V5	Uncharacterized protein.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.816
A1Q2_03764	A1Q2_03727	K1VD81	K1VRC1	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.660
A1Q2_03764	A1Q2_04104	K1VD81	K1VXP6	Dihydrolipoyl dehydrogenase.	Type 2C Protein Phosphatase.	0.769
A1Q2_03764	A1Q2_04294	K1VD81	K1VPQ2	Dihydrolipoyl dehydrogenase.	Pyruvate dehydrogenase protein x component.	0.996
A1Q2_03764	A1Q2_06470	K1VD81	K1VEK5	Dihydrolipoyl dehydrogenase.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.999
A1Q2_03764	A1Q2_06856	K1VD81	K1VDG1	Dihydrolipoyl dehydrogenase.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.999
A1Q2_03764	A1Q2_07473	K1VD81	K1V2V5	Dihydrolipoyl dehydrogenase.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.990
A1Q2_03764	A1Q2_07885	K1VD81	K1VMD4	Dihydrolipoyl dehydrogenase.	Protein-serine/threonine kinase.	0.863
A1Q2_04104	A1Q2_03764	K1VXP6	K1VD81	Type 2C Protein Phosphatase.	Dihydrolipoyl dehydrogenase.	0.769
A1Q2_04104	A1Q2_04294	K1VXP6	K1VPQ2	Type 2C Protein Phosphatase.	Pyruvate dehydrogenase protein x component.	0.766
A1Q2_04104	A1Q2_06470	K1VXP6	K1VEK5	Type 2C Protein Phosphatase.	Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.	0.841
A1Q2_04104	A1Q2_06856	K1VXP6	K1VDG1	Type 2C Protein Phosphatase.	Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.811
A1Q2_04104	A1Q2_07473	K1VXP6	K1V2V5	Type 2C Protein Phosphatase.	Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).	0.869
A1Q2_04104	A1Q2_07885	K1VXP6	K1VMD4	Type 2C Protein Phosphatase.	Protein-serine/threonine kinase.	0.529
A1Q2_04294	A1Q2_03727	K1VPQ2	K1VRC1	Pyruvate dehydrogenase protein x component.	Uncharacterized protein.	0.574