STRINGSTRING
EYZ11_001114 EYZ11_001114 EYZ11_010245 EYZ11_010245 UFD1 UFD1 EYZ11_008544 EYZ11_008544 EYZ11_007990 EYZ11_007990 EYZ11_006560 EYZ11_006560 EYZ11_002866 EYZ11_002866 EYZ11_002345 EYZ11_002345 EYZ11_003746 EYZ11_003746 EYZ11_001426 EYZ11_001426 EYZ11_000218 EYZ11_000218 EYZ11_009438 EYZ11_009438 NPL4 NPL4 EYZ11_003266 EYZ11_003266
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EYZ11_001114CPSF_A domain-containing protein. (1148 aa)
EYZ11_010245RNase_PH domain-containing protein. (381 aa)
UFD1Ubiquitin fusion degradation protein. (450 aa)
EYZ11_008544RNase_PH domain-containing protein. (244 aa)
EYZ11_007990Uncharacterized protein; Belongs to the RNR ribonuclease family. (936 aa)
EYZ11_006560Uncharacterized protein. (248 aa)
EYZ11_002866Uncharacterized protein. (292 aa)
EYZ11_002345Uncharacterized protein. (865 aa)
EYZ11_003746HRDC domain-containing protein. (803 aa)
EYZ11_001426RNase_PH domain-containing protein. (415 aa)
EYZ11_000218Uncharacterized protein. (250 aa)
EYZ11_009438Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (415 aa)
NPL4Nuclear protein localization protein 4. (649 aa)
EYZ11_003266AAA domain-containing protein; Belongs to the AAA ATPase family. (399 aa)
Your Current Organism:
Aspergillus tanneri
NCBI taxonomy Id: 1220188
Other names: A. tanneri, ATCC MYA-4905, Aspergillus tanneri Kwon-Chung, Sugui & S. W. Peterson 2012, NIH1004, NRRL 62425, NRRL 62426, NRRL 63426
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