53 items (Cyphellophora europaea) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RJQ3_9EURO	Uncharacterized protein. (1308 aa)
	W2RKJ7_9EURO	Nop domain-containing protein. (593 aa)
	W2RL26_9EURO	Uncharacterized protein. (1150 aa)
	W2RLA3_9EURO	U1-type domain-containing protein. (300 aa)
	W2RLQ3_9EURO	Tr-type G domain-containing protein. (980 aa)
	W2RM67_9EURO	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (192 aa)
	W2RN24_9EURO	WD_REPEATS_REGION domain-containing protein. (525 aa)
	W2RN98_9EURO	F-box domain-containing protein. (609 aa)
	W2RPC3_9EURO	Pre-mRNA-splicing factor spp42. (2361 aa)
	W2RPZ1_9EURO	Pre-mRNA-splicing ATP-dependent RNA helicase prp28; Belongs to the DEAD box helicase family. (752 aa)
	W2RQF4_9EURO	Uncharacterized protein. (313 aa)
	W2RRF9_9EURO	Sm domain-containing protein. (205 aa)
	W2RRN3_9EURO	Uncharacterized protein. (110 aa)
	W2RRW7_9EURO	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (131 aa)
	W2RS33_9EURO	Uncharacterized protein. (263 aa)
	W2RT14_9EURO	Nuclear cap-binding protein subunit 2. (171 aa)
	W2RT53_9EURO	Uncharacterized protein. (291 aa)
	W2RT57_9EURO	Uncharacterized protein. (939 aa)
	W2RTU9_9EURO	Uncharacterized protein. (494 aa)
	W2RUD8_9EURO	RRM domain-containing protein. (115 aa)
	W2RVM6_9EURO	Uncharacterized protein. (848 aa)
	W2RW68_9EURO	Uncharacterized protein. (359 aa)
	W2RWL2_9EURO	Uncharacterized protein. (160 aa)
	W2RX58_9EURO	Uncharacterized protein. (580 aa)
	W2RX70_9EURO	PSP domain-containing protein. (573 aa)
	W2RY43_9EURO	Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
	W2RYF6_9EURO	Sm domain-containing protein. (110 aa)
	W2RYY8_9EURO	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
	W2RZ28_9EURO	Small nuclear ribonucleoprotein Sm D2. (76 aa)
	W2S0L2_9EURO	Uncharacterized protein. (234 aa)
	W2S165_9EURO	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	W2S1D8_9EURO	G-patch domain-containing protein. (523 aa)
	W2S2P1_9EURO	Uncharacterized protein. (246 aa)
	W2S3D9_9EURO	SF3b1 domain-containing protein. (1216 aa)
	W2S3V5_9EURO	Small nuclear ribonucleoprotein G. (80 aa)
	W2S640_9EURO	Uncharacterized protein. (662 aa)
	W2S7X9_9EURO	C2H2-type domain-containing protein. (217 aa)
	W2S8D0_9EURO	Uncharacterized protein. (366 aa)
	W2S8E6_9EURO	RRM domain-containing protein. (369 aa)
	W2S8K8_9EURO	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	W2S8W6_9EURO	Uncharacterized protein. (254 aa)
	W2S926_9EURO	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	W2SAA7_9EURO	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (766 aa)
	W2SAL4_9EURO	MFAP1 domain-containing protein. (490 aa)
	W2SAV4_9EURO	Matrin-type domain-containing protein. (519 aa)
	W2SBR1_9EURO	WD_REPEATS_REGION domain-containing protein. (362 aa)
	W2SCM4_9EURO	Uncharacterized protein. (527 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	W2SD60_9EURO	Matrin-type domain-containing protein. (233 aa)
	W2SE03_9EURO	Pre-mRNA-splicing factor rse1. (1212 aa)
	W2SGF3_9EURO	CID domain-containing protein. (774 aa)
	W2SGQ3_9EURO	Uncharacterized protein. (219 aa)
	W2SGT0_9EURO	Uncharacterized protein. (2221 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM8	W2RJQ3_9EURO	W2SCV7	W2RJQ3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.825
LSM8	W2RKJ7_9EURO	W2SCV7	W2RKJ7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nop domain-containing protein.	0.995
LSM8	W2RLA3_9EURO	W2SCV7	W2RLA3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	U1-type domain-containing protein.	0.719
LSM8	W2RLQ3_9EURO	W2SCV7	W2RLQ3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Tr-type G domain-containing protein.	0.990
LSM8	W2RM67_9EURO	W2SCV7	W2RM67	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.811
LSM8	W2RN24_9EURO	W2SCV7	W2RN24	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	WD_REPEATS_REGION domain-containing protein.	0.989
LSM8	W2RN98_9EURO	W2SCV7	W2RN98	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	F-box domain-containing protein.	0.928
LSM8	W2RPC3_9EURO	W2SCV7	W2RPC3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing factor spp42.	0.988
LSM8	W2RPZ1_9EURO	W2SCV7	W2RPZ1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA-splicing ATP-dependent RNA helicase prp28; Belongs to the DEAD box helicase family.	0.788
LSM8	W2RQF4_9EURO	W2SCV7	W2RQF4	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.934
LSM8	W2RRF9_9EURO	W2SCV7	W2RRF9	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.945
LSM8	W2RRN3_9EURO	W2SCV7	W2RRN3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.976
LSM8	W2RRW7_9EURO	W2SCV7	W2RRW7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.981
LSM8	W2RS33_9EURO	W2SCV7	W2RS33	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.855
LSM8	W2RT14_9EURO	W2SCV7	W2RT14	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nuclear cap-binding protein subunit 2.	0.728
LSM8	W2RT57_9EURO	W2SCV7	W2RT57	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.988
LSM8	W2RTU9_9EURO	W2SCV7	W2RTU9	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.508
LSM8	W2RUD8_9EURO	W2SCV7	W2RUD8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	RRM domain-containing protein.	0.676
LSM8	W2RVM6_9EURO	W2SCV7	W2RVM6	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.785
LSM8	W2RW68_9EURO	W2SCV7	W2RW68	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.894