24 items (Cyphellophora europaea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RL26_9EURO	Uncharacterized protein. (1150 aa)
	W2RRF9_9EURO	Sm domain-containing protein. (205 aa)
	W2RRN3_9EURO	Uncharacterized protein. (110 aa)
	W2RRW7_9EURO	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (131 aa)
	W2RT14_9EURO	Nuclear cap-binding protein subunit 2. (171 aa)
	W2RUD8_9EURO	RRM domain-containing protein. (115 aa)
	W2RVM6_9EURO	Uncharacterized protein. (848 aa)
	W2RW68_9EURO	Uncharacterized protein. (359 aa)
	W2RWL2_9EURO	Uncharacterized protein. (160 aa)
	W2RX70_9EURO	PSP domain-containing protein. (573 aa)
	W2RY43_9EURO	Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
	W2RYF6_9EURO	Sm domain-containing protein. (110 aa)
	W2RYY8_9EURO	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
	W2RZ28_9EURO	Small nuclear ribonucleoprotein Sm D2. (76 aa)
	W2S165_9EURO	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	W2S3D9_9EURO	SF3b1 domain-containing protein. (1216 aa)
	W2S3V5_9EURO	Small nuclear ribonucleoprotein G. (80 aa)
	W2S8E6_9EURO	RRM domain-containing protein. (369 aa)
	W2S8K8_9EURO	Small nuclear ribonucleoprotein Sm D3. (116 aa)
	W2S8W6_9EURO	Uncharacterized protein. (254 aa)
	W2SAV4_9EURO	Matrin-type domain-containing protein. (519 aa)
	W2SCM4_9EURO	Uncharacterized protein. (527 aa)
	W2SD60_9EURO	Matrin-type domain-containing protein. (233 aa)
	W2SE03_9EURO	Pre-mRNA-splicing factor rse1. (1212 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RL26_9EURO	W2RRF9_9EURO	W2RL26	W2RRF9	Uncharacterized protein.	Sm domain-containing protein.	0.964
W2RL26_9EURO	W2RRN3_9EURO	W2RL26	W2RRN3	Uncharacterized protein.	Uncharacterized protein.	0.998
W2RL26_9EURO	W2RRW7_9EURO	W2RL26	W2RRW7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.992
W2RL26_9EURO	W2RT14_9EURO	W2RL26	W2RT14	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.967
W2RL26_9EURO	W2RUD8_9EURO	W2RL26	W2RUD8	Uncharacterized protein.	RRM domain-containing protein.	0.891
W2RL26_9EURO	W2RVM6_9EURO	W2RL26	W2RVM6	Uncharacterized protein.	Uncharacterized protein.	0.839
W2RL26_9EURO	W2RW68_9EURO	W2RL26	W2RW68	Uncharacterized protein.	Uncharacterized protein.	0.976
W2RL26_9EURO	W2RWL2_9EURO	W2RL26	W2RWL2	Uncharacterized protein.	Uncharacterized protein.	0.898
W2RL26_9EURO	W2RX70_9EURO	W2RL26	W2RX70	Uncharacterized protein.	PSP domain-containing protein.	0.985
W2RL26_9EURO	W2RY43_9EURO	W2RL26	W2RY43	Uncharacterized protein.	Splicing factor subunit; Belongs to the SF3B5 family.	0.994
W2RL26_9EURO	W2RYF6_9EURO	W2RL26	W2RYF6	Uncharacterized protein.	Sm domain-containing protein.	0.959
W2RL26_9EURO	W2RYY8_9EURO	W2RL26	W2RYY8	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.860
W2RL26_9EURO	W2RZ28_9EURO	W2RL26	W2RZ28	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.969
W2RL26_9EURO	W2S165_9EURO	W2RL26	W2S165	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.961
W2RL26_9EURO	W2S3D9_9EURO	W2RL26	W2S3D9	Uncharacterized protein.	SF3b1 domain-containing protein.	0.996
W2RL26_9EURO	W2S3V5_9EURO	W2RL26	W2S3V5	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.960
W2RL26_9EURO	W2S8E6_9EURO	W2RL26	W2S8E6	Uncharacterized protein.	RRM domain-containing protein.	0.786
W2RL26_9EURO	W2S8K8_9EURO	W2RL26	W2S8K8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3.	0.926
W2RL26_9EURO	W2S8W6_9EURO	W2RL26	W2S8W6	Uncharacterized protein.	Uncharacterized protein.	0.940
W2RL26_9EURO	W2SAV4_9EURO	W2RL26	W2SAV4	Uncharacterized protein.	Matrin-type domain-containing protein.	0.995