52 items (Cyphellophora europaea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RT14_9EURO	Nuclear cap-binding protein subunit 2. (171 aa)
	W2SE21_9EURO	Sm domain-containing protein. (135 aa)
	W2SD60_9EURO	Matrin-type domain-containing protein. (233 aa)
	W2SCM4_9EURO	Uncharacterized protein. (527 aa)
	W2SC82_9EURO	Pre-mRNA-splicing factor slt11. (376 aa)
	W2SBD0_9EURO	PWI domain-containing protein. (764 aa)
	W2SB76_9EURO	Pre-mRNA-splicing factor syf1. (842 aa)
	W2SAV4_9EURO	Matrin-type domain-containing protein. (519 aa)
	W2SAL4_9EURO	MFAP1 domain-containing protein. (490 aa)
	W2SAA7_9EURO	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (766 aa)
	W2S9G1_9EURO	Cir_N domain-containing protein. (403 aa)
	W2S8F1_9EURO	Uncharacterized protein. (473 aa)
	W2S8E6_9EURO	RRM domain-containing protein. (369 aa)
	W2S774_9EURO	WW domain-containing protein. (262 aa)
	W2S4F8_9EURO	Branchpoint-bridging protein. (560 aa)
	W2S3Z7_9EURO	Uncharacterized protein. (360 aa)
	W2S3V5_9EURO	Small nuclear ribonucleoprotein G. (80 aa)
	W2S3D9_9EURO	SF3b1 domain-containing protein. (1216 aa)
	W2S2N6_9EURO	Uncharacterized protein. (383 aa)
	W2S2D0_9EURO	C2H2-type domain-containing protein. (165 aa)
	W2S1Z5_9EURO	Uncharacterized protein. (460 aa)
	W2S1R0_9EURO	Uncharacterized protein. (1637 aa)
	W2S165_9EURO	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	W2RZJ3_9EURO	Uncharacterized protein. (260 aa)
	W2RZ28_9EURO	Small nuclear ribonucleoprotein Sm D2. (76 aa)
	W2RYY8_9EURO	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
	W2RYU1_9EURO	Uncharacterized protein. (692 aa)
	W2RX70_9EURO	PSP domain-containing protein. (573 aa)
	W2RW68_9EURO	Uncharacterized protein. (359 aa)
	W2RW48_9EURO	Uncharacterized protein. (314 aa)
	W2RVS5_9EURO	Uncharacterized protein. (418 aa)
	W2RV60_9EURO	Uncharacterized protein. (205 aa)
	W2RUZ6_9EURO	Uncharacterized protein. (308 aa)
	W2RUD8_9EURO	RRM domain-containing protein. (115 aa)
	W2RU18_9EURO	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (558 aa)
	W2RTU9_9EURO	Uncharacterized protein. (494 aa)
	W2RS67_9EURO	Uncharacterized protein. (337 aa)
	W2RS29_9EURO	Uncharacterized protein. (577 aa)
	W2RS17_9EURO	Uncharacterized protein. (295 aa)
	W2RRW7_9EURO	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (131 aa)
	W2RRF9_9EURO	Sm domain-containing protein. (205 aa)
	W2RPT2_9EURO	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1425 aa)
	W2RP76_9EURO	RRM domain-containing protein. (191 aa)
	W2RMG8_9EURO	G-patch domain-containing protein. (658 aa)
	W2RLQ3_9EURO	Tr-type G domain-containing protein. (980 aa)
	W2RLE2_9EURO	RRM domain-containing protein. (373 aa)
	W2RLA3_9EURO	U1-type domain-containing protein. (300 aa)
	W2RL26_9EURO	Uncharacterized protein. (1150 aa)
	W2RL05_9EURO	Uncharacterized protein. (1002 aa)
	W2RKI9_9EURO	Pre-mRNA-splicing factor clf1. (678 aa)
	W2RJF0_9EURO	Uncharacterized protein. (761 aa)
	W2RJA1_9EURO	Uncharacterized protein. (295 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RJA1_9EURO	W2RKI9_9EURO	W2RJA1	W2RKI9	Uncharacterized protein.	Pre-mRNA-splicing factor clf1.	0.975
W2RJA1_9EURO	W2RL05_9EURO	W2RJA1	W2RL05	Uncharacterized protein.	Uncharacterized protein.	0.996
W2RJA1_9EURO	W2RL26_9EURO	W2RJA1	W2RL26	Uncharacterized protein.	Uncharacterized protein.	0.685
W2RJA1_9EURO	W2RLQ3_9EURO	W2RJA1	W2RLQ3	Uncharacterized protein.	Tr-type G domain-containing protein.	0.960
W2RJA1_9EURO	W2RMG8_9EURO	W2RJA1	W2RMG8	Uncharacterized protein.	G-patch domain-containing protein.	0.914
W2RJA1_9EURO	W2RP76_9EURO	W2RJA1	W2RP76	Uncharacterized protein.	RRM domain-containing protein.	0.817
W2RJA1_9EURO	W2RPT2_9EURO	W2RJA1	W2RPT2	Uncharacterized protein.	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.	0.884
W2RJA1_9EURO	W2RRF9_9EURO	W2RJA1	W2RRF9	Uncharacterized protein.	Sm domain-containing protein.	0.808
W2RJA1_9EURO	W2RRW7_9EURO	W2RJA1	W2RRW7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.899
W2RJA1_9EURO	W2RU18_9EURO	W2RJA1	W2RU18	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.443
W2RJA1_9EURO	W2RV60_9EURO	W2RJA1	W2RV60	Uncharacterized protein.	Uncharacterized protein.	0.775
W2RJA1_9EURO	W2RVS5_9EURO	W2RJA1	W2RVS5	Uncharacterized protein.	Uncharacterized protein.	0.969
W2RJA1_9EURO	W2RW48_9EURO	W2RJA1	W2RW48	Uncharacterized protein.	Uncharacterized protein.	0.712
W2RJA1_9EURO	W2RX70_9EURO	W2RJA1	W2RX70	Uncharacterized protein.	PSP domain-containing protein.	0.573
W2RJA1_9EURO	W2RZ28_9EURO	W2RJA1	W2RZ28	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.901
W2RJA1_9EURO	W2RZJ3_9EURO	W2RJA1	W2RZJ3	Uncharacterized protein.	Uncharacterized protein.	0.962
W2RJA1_9EURO	W2S165_9EURO	W2RJA1	W2S165	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.892
W2RJA1_9EURO	W2S2D0_9EURO	W2RJA1	W2S2D0	Uncharacterized protein.	C2H2-type domain-containing protein.	0.852
W2RJA1_9EURO	W2S2N6_9EURO	W2RJA1	W2S2N6	Uncharacterized protein.	Uncharacterized protein.	0.666
W2RJA1_9EURO	W2S3D9_9EURO	W2RJA1	W2S3D9	Uncharacterized protein.	SF3b1 domain-containing protein.	0.601