(6 nodes) GID complex network (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RIK3_9EURO	Uncharacterized protein. (609 aa)
	W2SBF6_9EURO	Uncharacterized protein. (402 aa)
	W2S8K5_9EURO	Uncharacterized protein. (935 aa)
	W2S2K2_9EURO	Uncharacterized protein. (642 aa)
	W2RZR4_9EURO	Uncharacterized protein. (282 aa)
	W2RIA1_9EURO	Uncharacterized protein. (331 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RIA1_9EURO	W2RIK3_9EURO	W2RIA1	W2RIK3	Uncharacterized protein.	Uncharacterized protein.	0.827
W2RIA1_9EURO	W2RZR4_9EURO	W2RIA1	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.949
W2RIA1_9EURO	W2S2K2_9EURO	W2RIA1	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.968
W2RIA1_9EURO	W2SBF6_9EURO	W2RIA1	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.892
W2RIK3_9EURO	W2RIA1_9EURO	W2RIK3	W2RIA1	Uncharacterized protein.	Uncharacterized protein.	0.827
W2RIK3_9EURO	W2RZR4_9EURO	W2RIK3	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.970
W2RIK3_9EURO	W2S2K2_9EURO	W2RIK3	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.991
W2RIK3_9EURO	W2SBF6_9EURO	W2RIK3	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.947
W2RZR4_9EURO	W2RIA1_9EURO	W2RZR4	W2RIA1	Uncharacterized protein.	Uncharacterized protein.	0.949
W2RZR4_9EURO	W2RIK3_9EURO	W2RZR4	W2RIK3	Uncharacterized protein.	Uncharacterized protein.	0.970
W2RZR4_9EURO	W2S2K2_9EURO	W2RZR4	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.990
W2RZR4_9EURO	W2SBF6_9EURO	W2RZR4	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.949
W2S2K2_9EURO	W2RIA1_9EURO	W2S2K2	W2RIA1	Uncharacterized protein.	Uncharacterized protein.	0.968
W2S2K2_9EURO	W2RIK3_9EURO	W2S2K2	W2RIK3	Uncharacterized protein.	Uncharacterized protein.	0.991
W2S2K2_9EURO	W2RZR4_9EURO	W2S2K2	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.990
W2S2K2_9EURO	W2SBF6_9EURO	W2S2K2	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.950
W2SBF6_9EURO	W2RIA1_9EURO	W2SBF6	W2RIA1	Uncharacterized protein.	Uncharacterized protein.	0.892
W2SBF6_9EURO	W2RIK3_9EURO	W2SBF6	W2RIK3	Uncharacterized protein.	Uncharacterized protein.	0.947
W2SBF6_9EURO	W2RZR4_9EURO	W2SBF6	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.949
W2SBF6_9EURO	W2S2K2_9EURO	W2SBF6	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.950