25 items (Cyphellophora europaea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RRF9_9EURO	Sm domain-containing protein. (205 aa)
	W2SE21_9EURO	Sm domain-containing protein. (135 aa)
	W2S8E6_9EURO	RRM domain-containing protein. (369 aa)
	W2S4F8_9EURO	Branchpoint-bridging protein. (560 aa)
	W2S3V5_9EURO	Small nuclear ribonucleoprotein G. (80 aa)
	W2S3D9_9EURO	SF3b1 domain-containing protein. (1216 aa)
	W2S1R0_9EURO	Uncharacterized protein. (1637 aa)
	W2S165_9EURO	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
	W2RJF0_9EURO	Uncharacterized protein. (761 aa)
	W2RKI9_9EURO	Pre-mRNA-splicing factor clf1. (678 aa)
	W2RL26_9EURO	Uncharacterized protein. (1150 aa)
	W2RP76_9EURO	RRM domain-containing protein. (191 aa)
	W2RZ28_9EURO	Small nuclear ribonucleoprotein Sm D2. (76 aa)
	W2RYY8_9EURO	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
	W2RX70_9EURO	PSP domain-containing protein. (573 aa)
	W2RW68_9EURO	Uncharacterized protein. (359 aa)
	W2RU18_9EURO	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (558 aa)
	W2RTU9_9EURO	Uncharacterized protein. (494 aa)
	W2RS29_9EURO	Uncharacterized protein. (577 aa)
	W2RS17_9EURO	Uncharacterized protein. (295 aa)
	W2RRW7_9EURO	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (131 aa)
	W2SD60_9EURO	Matrin-type domain-containing protein. (233 aa)
	W2SCM4_9EURO	Uncharacterized protein. (527 aa)
	W2SBD0_9EURO	PWI domain-containing protein. (764 aa)
	W2SAV4_9EURO	Matrin-type domain-containing protein. (519 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RJF0_9EURO	W2RL26_9EURO	W2RJF0	W2RL26	Uncharacterized protein.	Uncharacterized protein.	0.887
W2RJF0_9EURO	W2RP76_9EURO	W2RJF0	W2RP76	Uncharacterized protein.	RRM domain-containing protein.	0.619
W2RJF0_9EURO	W2RRF9_9EURO	W2RJF0	W2RRF9	Uncharacterized protein.	Sm domain-containing protein.	0.825
W2RJF0_9EURO	W2RRW7_9EURO	W2RJF0	W2RRW7	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.881
W2RJF0_9EURO	W2RS17_9EURO	W2RJF0	W2RS17	Uncharacterized protein.	Uncharacterized protein.	0.937
W2RJF0_9EURO	W2RS29_9EURO	W2RJF0	W2RS29	Uncharacterized protein.	Uncharacterized protein.	0.914
W2RJF0_9EURO	W2RTU9_9EURO	W2RJF0	W2RTU9	Uncharacterized protein.	Uncharacterized protein.	0.464
W2RJF0_9EURO	W2RU18_9EURO	W2RJF0	W2RU18	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.933
W2RJF0_9EURO	W2RW68_9EURO	W2RJF0	W2RW68	Uncharacterized protein.	Uncharacterized protein.	0.716
W2RJF0_9EURO	W2RX70_9EURO	W2RJF0	W2RX70	Uncharacterized protein.	PSP domain-containing protein.	0.883
W2RJF0_9EURO	W2RYY8_9EURO	W2RJF0	W2RYY8	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.916
W2RJF0_9EURO	W2RZ28_9EURO	W2RJF0	W2RZ28	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D2.	0.747
W2RJF0_9EURO	W2S165_9EURO	W2RJF0	W2S165	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.888
W2RJF0_9EURO	W2S1R0_9EURO	W2RJF0	W2S1R0	Uncharacterized protein.	Uncharacterized protein.	0.852
W2RJF0_9EURO	W2S3D9_9EURO	W2RJF0	W2S3D9	Uncharacterized protein.	SF3b1 domain-containing protein.	0.622
W2RJF0_9EURO	W2S3V5_9EURO	W2RJF0	W2S3V5	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.839
W2RJF0_9EURO	W2S4F8_9EURO	W2RJF0	W2S4F8	Uncharacterized protein.	Branchpoint-bridging protein.	0.929
W2RJF0_9EURO	W2S8E6_9EURO	W2RJF0	W2S8E6	Uncharacterized protein.	RRM domain-containing protein.	0.939
W2RJF0_9EURO	W2SAV4_9EURO	W2RJF0	W2SAV4	Uncharacterized protein.	Matrin-type domain-containing protein.	0.648
W2RJF0_9EURO	W2SBD0_9EURO	W2RJF0	W2SBD0	Uncharacterized protein.	PWI domain-containing protein.	0.963