(7 nodes) Snf7 family network (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2SAB5_9EURO	Uncharacterized protein. (480 aa)
	W2S547_9EURO	Uncharacterized protein. (220 aa)
	W2S0A3_9EURO	Uncharacterized protein. (213 aa)
	W2RZW8_9EURO	Uncharacterized protein. (229 aa)
	W2RN17_9EURO	Uncharacterized protein. (218 aa)
	W2SDQ9_9EURO	Uncharacterized protein. (205 aa)
	W2SAS7_9EURO	Uncharacterized protein. (209 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RN17_9EURO	W2RZW8_9EURO	W2RN17	W2RZW8	Uncharacterized protein.	Uncharacterized protein.	0.969
W2RN17_9EURO	W2S0A3_9EURO	W2RN17	W2S0A3	Uncharacterized protein.	Uncharacterized protein.	0.929
W2RN17_9EURO	W2S547_9EURO	W2RN17	W2S547	Uncharacterized protein.	Uncharacterized protein.	0.988
W2RN17_9EURO	W2SAB5_9EURO	W2RN17	W2SAB5	Uncharacterized protein.	Uncharacterized protein.	0.904
W2RN17_9EURO	W2SAS7_9EURO	W2RN17	W2SAS7	Uncharacterized protein.	Uncharacterized protein.	0.988
W2RN17_9EURO	W2SDQ9_9EURO	W2RN17	W2SDQ9	Uncharacterized protein.	Uncharacterized protein.	0.988
W2RZW8_9EURO	W2RN17_9EURO	W2RZW8	W2RN17	Uncharacterized protein.	Uncharacterized protein.	0.969
W2RZW8_9EURO	W2S0A3_9EURO	W2RZW8	W2S0A3	Uncharacterized protein.	Uncharacterized protein.	0.997
W2RZW8_9EURO	W2S547_9EURO	W2RZW8	W2S547	Uncharacterized protein.	Uncharacterized protein.	0.999
W2RZW8_9EURO	W2SAB5_9EURO	W2RZW8	W2SAB5	Uncharacterized protein.	Uncharacterized protein.	0.992
W2RZW8_9EURO	W2SAS7_9EURO	W2RZW8	W2SAS7	Uncharacterized protein.	Uncharacterized protein.	0.999
W2RZW8_9EURO	W2SDQ9_9EURO	W2RZW8	W2SDQ9	Uncharacterized protein.	Uncharacterized protein.	0.989
W2S0A3_9EURO	W2RN17_9EURO	W2S0A3	W2RN17	Uncharacterized protein.	Uncharacterized protein.	0.929
W2S0A3_9EURO	W2RZW8_9EURO	W2S0A3	W2RZW8	Uncharacterized protein.	Uncharacterized protein.	0.997
W2S0A3_9EURO	W2S547_9EURO	W2S0A3	W2S547	Uncharacterized protein.	Uncharacterized protein.	0.998
W2S0A3_9EURO	W2SAB5_9EURO	W2S0A3	W2SAB5	Uncharacterized protein.	Uncharacterized protein.	0.991
W2S0A3_9EURO	W2SAS7_9EURO	W2S0A3	W2SAS7	Uncharacterized protein.	Uncharacterized protein.	0.997
W2S0A3_9EURO	W2SDQ9_9EURO	W2S0A3	W2SDQ9	Uncharacterized protein.	Uncharacterized protein.	0.934
W2S547_9EURO	W2RN17_9EURO	W2S547	W2RN17	Uncharacterized protein.	Uncharacterized protein.	0.988
W2S547_9EURO	W2RZW8_9EURO	W2S547	W2RZW8	Uncharacterized protein.	Uncharacterized protein.	0.999