(9 nodes) LIS1 homology motif network (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2S7I3_9EURO	Uncharacterized protein. (751 aa)
	W2RMJ8_9EURO	LisH domain-containing protein. (494 aa)
	W2RPN5_9EURO	Uncharacterized protein. (663 aa)
	W2RX52_9EURO	Uncharacterized protein. (427 aa)
	W2RZR4_9EURO	Uncharacterized protein. (282 aa)
	W2S2K2_9EURO	Uncharacterized protein. (642 aa)
	W2S5S1_9EURO	LisH domain-containing protein. (428 aa)
	W2SBF6_9EURO	Uncharacterized protein. (402 aa)
	W2SC03_9EURO	LisH domain-containing protein. (705 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RX52_9EURO	W2RZR4_9EURO	W2RX52	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.952
W2RX52_9EURO	W2S2K2_9EURO	W2RX52	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.954
W2RX52_9EURO	W2SBF6_9EURO	W2RX52	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.949
W2RZR4_9EURO	W2RX52_9EURO	W2RZR4	W2RX52	Uncharacterized protein.	Uncharacterized protein.	0.952
W2RZR4_9EURO	W2S2K2_9EURO	W2RZR4	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.990
W2RZR4_9EURO	W2SBF6_9EURO	W2RZR4	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.949
W2S2K2_9EURO	W2RX52_9EURO	W2S2K2	W2RX52	Uncharacterized protein.	Uncharacterized protein.	0.954
W2S2K2_9EURO	W2RZR4_9EURO	W2S2K2	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.990
W2S2K2_9EURO	W2SBF6_9EURO	W2S2K2	W2SBF6	Uncharacterized protein.	Uncharacterized protein.	0.950
W2SBF6_9EURO	W2RX52_9EURO	W2SBF6	W2RX52	Uncharacterized protein.	Uncharacterized protein.	0.949
W2SBF6_9EURO	W2RZR4_9EURO	W2SBF6	W2RZR4	Uncharacterized protein.	Uncharacterized protein.	0.949
W2SBF6_9EURO	W2S2K2_9EURO	W2SBF6	W2S2K2	Uncharacterized protein.	Uncharacterized protein.	0.950