(15 nodes) AAA ATPase, AAA+ lid domain network (Cyphellophora europaea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2RLN0_9EURO	AAA domain-containing protein. (1697 aa)
	W2SGR4_9EURO	AAA domain-containing protein; Belongs to the AAA ATPase family. (410 aa)
	W2SGH7_9EURO	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	W2SEK8_9EURO	Uncharacterized protein. (744 aa)
	W2SBZ6_9EURO	Uncharacterized protein. (787 aa)
	W2S4X8_9EURO	AAA domain-containing protein; Belongs to the AAA ATPase family. (803 aa)
	W2S0E8_9EURO	Uncharacterized protein. (806 aa)
	W2RZK4_9EURO	Cell division control protein 48; Belongs to the AAA ATPase family. (820 aa)
	W2RV24_9EURO	AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
	W2RXM3_9EURO	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (464 aa)
	W2RUM3_9EURO	AAA domain-containing protein. (924 aa)
	W2RRG7_9EURO	Uncharacterized protein. (1258 aa)
	W2RPZ5_9EURO	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
	W2RPV6_9EURO	AAA domain-containing protein. (774 aa)
	W2RMT2_9EURO	AAA domain-containing protein. (1026 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RLN0_9EURO	W2RMT2_9EURO	W2RLN0	W2RMT2	AAA domain-containing protein.	AAA domain-containing protein.	0.449
W2RLN0_9EURO	W2RPZ5_9EURO	W2RLN0	W2RPZ5	AAA domain-containing protein.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.747
W2RLN0_9EURO	W2RRG7_9EURO	W2RLN0	W2RRG7	AAA domain-containing protein.	Uncharacterized protein.	0.449
W2RLN0_9EURO	W2RXM3_9EURO	W2RLN0	W2RXM3	AAA domain-containing protein.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.762
W2RLN0_9EURO	W2RZK4_9EURO	W2RLN0	W2RZK4	AAA domain-containing protein.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.580
W2RLN0_9EURO	W2S0E8_9EURO	W2RLN0	W2S0E8	AAA domain-containing protein.	Uncharacterized protein.	0.449
W2RLN0_9EURO	W2S4X8_9EURO	W2RLN0	W2S4X8	AAA domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.449
W2RLN0_9EURO	W2SBZ6_9EURO	W2RLN0	W2SBZ6	AAA domain-containing protein.	Uncharacterized protein.	0.494
W2RLN0_9EURO	W2SEK8_9EURO	W2RLN0	W2SEK8	AAA domain-containing protein.	Uncharacterized protein.	0.631
W2RLN0_9EURO	W2SGR4_9EURO	W2RLN0	W2SGR4	AAA domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.486
W2RMT2_9EURO	W2RLN0_9EURO	W2RMT2	W2RLN0	AAA domain-containing protein.	AAA domain-containing protein.	0.449
W2RMT2_9EURO	W2RPZ5_9EURO	W2RMT2	W2RPZ5	AAA domain-containing protein.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.488
W2RMT2_9EURO	W2RV24_9EURO	W2RMT2	W2RV24	AAA domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.501
W2RMT2_9EURO	W2RXM3_9EURO	W2RMT2	W2RXM3	AAA domain-containing protein.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.513
W2RMT2_9EURO	W2SGH7_9EURO	W2RMT2	W2SGH7	AAA domain-containing protein.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.500
W2RPV6_9EURO	W2RUM3_9EURO	W2RPV6	W2RUM3	AAA domain-containing protein.	AAA domain-containing protein.	0.554
W2RPZ5_9EURO	W2RLN0_9EURO	W2RPZ5	W2RLN0	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	AAA domain-containing protein.	0.747
W2RPZ5_9EURO	W2RMT2_9EURO	W2RPZ5	W2RMT2	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	AAA domain-containing protein.	0.488
W2RPZ5_9EURO	W2RRG7_9EURO	W2RPZ5	W2RRG7	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.466
W2RPZ5_9EURO	W2RV24_9EURO	W2RPZ5	W2RV24	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999