45 items (Cyphellophora europaea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W2S507_9EURO	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1748 aa)
	W2RM86_9EURO	Uncharacterized protein. (153 aa)
	W2RN82_9EURO	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (487 aa)
	W2RNR3_9EURO	RPOL4c domain-containing protein. (153 aa)
	W2RPZ7_9EURO	Uncharacterized protein. (633 aa)
	W2RQ35_9EURO	RNA_pol_L_2 domain-containing protein. (165 aa)
	W2RQ41_9EURO	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1408 aa)
	W2RRG5_9EURO	RING-type domain-containing protein. (270 aa)
	W2RS73_9EURO	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1076 aa)
	W2RSI0_9EURO	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
	W2RT14_9EURO	Nuclear cap-binding protein subunit 2. (171 aa)
	W2RTP8_9EURO	Uncharacterized protein. (58 aa)
	W2RVC3_9EURO	CFEM domain-containing protein. (276 aa)
	W2RVM6_9EURO	Uncharacterized protein. (848 aa)
	W2RVV9_9EURO	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (118 aa)
	W2RWE9_9EURO	Uncharacterized protein. (1263 aa)
	W2RX63_9EURO	CYCLIN domain-containing protein; Belongs to the cyclin family. (364 aa)
	W2RXJ3_9EURO	DNA repair helicase rad15. (829 aa)
	W2RZG3_9EURO	Uncharacterized protein. (3217 aa)
	W2RZR1_9EURO	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
	W2RZZ1_9EURO	RPOLD domain-containing protein. (330 aa)
	W2S023_9EURO	Plus3 domain-containing protein. (617 aa)
	W2S217_9EURO	Uncharacterized protein. (520 aa)
	W2S2F1_9EURO	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (916 aa)
	W2S306_9EURO	VWFA domain-containing protein. (360 aa)
	W2S4M8_9EURO	Uncharacterized protein. (592 aa)
	W2RLJ1_9EURO	Uncharacterized protein. (381 aa)
	W2S5D4_9EURO	Uncharacterized protein. (677 aa)
	W2S6N8_9EURO	Uncharacterized protein. (514 aa)
	W2S7F8_9EURO	TFIIS N-terminal domain-containing protein. (400 aa)
	W2S7Q7_9EURO	Uncharacterized protein. (456 aa)
	W2S8D2_9EURO	Uncharacterized protein. (237 aa)
	W2S8N8_9EURO	Uncharacterized protein. (167 aa)
	W2SAA2_9EURO	Uncharacterized protein. (420 aa)
	W2SBG0_9EURO	CDC73_C domain-containing protein. (424 aa)
	W2SDN5_9EURO	Uncharacterized protein. (225 aa)
	W2SEF0_9EURO	Uncharacterized protein. (490 aa)
	W2SEK0_9EURO	Uncharacterized protein. (1013 aa)
	W2SEL6_9EURO	Uncharacterized protein. (80 aa)
	W2SG24_9EURO	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1265 aa)
	W2SGN5_9EURO	Uncharacterized protein. (592 aa)
	W2RIX2_9EURO	Uncharacterized protein. (66 aa)
	W2RIZ6_9EURO	TPR_REGION domain-containing protein. (423 aa)
	W2RLF2_9EURO	Uncharacterized protein. (837 aa)
	W2RLG2_9EURO	Uncharacterized protein. (726 aa)

Your Current Organism:

Cyphellophora europaea

NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W2RIX2_9EURO	W2RLF2_9EURO	W2RIX2	W2RLF2	Uncharacterized protein.	Uncharacterized protein.	0.968
W2RIX2_9EURO	W2RLJ1_9EURO	W2RIX2	W2RLJ1	Uncharacterized protein.	Uncharacterized protein.	0.965
W2RIX2_9EURO	W2RM86_9EURO	W2RIX2	W2RM86	Uncharacterized protein.	Uncharacterized protein.	0.999
W2RIX2_9EURO	W2RN82_9EURO	W2RIX2	W2RN82	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.964
W2RIX2_9EURO	W2RNR3_9EURO	W2RIX2	W2RNR3	Uncharacterized protein.	RPOL4c domain-containing protein.	0.999
W2RIX2_9EURO	W2RPZ7_9EURO	W2RIX2	W2RPZ7	Uncharacterized protein.	Uncharacterized protein.	0.961
W2RIX2_9EURO	W2RQ35_9EURO	W2RIX2	W2RQ35	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
W2RIX2_9EURO	W2RQ41_9EURO	W2RIX2	W2RQ41	Uncharacterized protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.905
W2RIX2_9EURO	W2RRG5_9EURO	W2RIX2	W2RRG5	Uncharacterized protein.	RING-type domain-containing protein.	0.970
W2RIX2_9EURO	W2RS73_9EURO	W2RIX2	W2RS73	Uncharacterized protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.993
W2RIX2_9EURO	W2RSI0_9EURO	W2RIX2	W2RSI0	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.864
W2RIX2_9EURO	W2RT14_9EURO	W2RIX2	W2RT14	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.736
W2RIX2_9EURO	W2RTP8_9EURO	W2RIX2	W2RTP8	Uncharacterized protein.	Uncharacterized protein.	0.999
W2RIX2_9EURO	W2RVC3_9EURO	W2RIX2	W2RVC3	Uncharacterized protein.	CFEM domain-containing protein.	0.926
W2RIX2_9EURO	W2RVV9_9EURO	W2RIX2	W2RVV9	Uncharacterized protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.988
W2RIX2_9EURO	W2RWE9_9EURO	W2RIX2	W2RWE9	Uncharacterized protein.	Uncharacterized protein.	0.923
W2RIX2_9EURO	W2RX63_9EURO	W2RIX2	W2RX63	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.924
W2RIX2_9EURO	W2RXJ3_9EURO	W2RIX2	W2RXJ3	Uncharacterized protein.	DNA repair helicase rad15.	0.964
W2RIX2_9EURO	W2RZG3_9EURO	W2RIX2	W2RZG3	Uncharacterized protein.	Uncharacterized protein.	0.747
W2RIX2_9EURO	W2RZR1_9EURO	W2RIX2	W2RZR1	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999