(24 nodes) Class I peroxisomal membrane protein import, and Mpv17/PMP22 network (Mucor circinelloides f. circinelloides)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	S2IUS8_MUCC1	WD_REPEATS_REGION domain-containing protein. (316 aa)
	S2J2E0_MUCC1	AAA domain-containing protein; Belongs to the AAA ATPase family. (373 aa)
	S2J523_MUCC1	Uncharacterized protein. (134 aa)
	S2J769_MUCC1	Uncharacterized protein. (228 aa)
	S2J7E9_MUCC1	Peroxisomal membrane protein PEX16. (371 aa)
	S2J9H1_MUCC1	SH3 domain-containing protein. (407 aa)
	S2J9Y9_MUCC1	Uncharacterized protein. (197 aa)
	S2JAJ1_MUCC1	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (177 aa)
	S2JCP3_MUCC1	Uncharacterized protein. (234 aa)
	S2JE92_MUCC1	Uncharacterized protein. (316 aa)
	S2JFC2_MUCC1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (319 aa)
	S2JFQ2_MUCC1	Uncharacterized protein. (273 aa)
	S2JFQ9_MUCC1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)
	S2JGJ1_MUCC1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	S2JHV2_MUCC1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (317 aa)
	S2JK97_MUCC1	Peroxisomal membrane protein PEX16. (371 aa)
	S2JL24_MUCC1	Uncharacterized protein. (508 aa)
	S2JMX9_MUCC1	Uncharacterized protein. (258 aa)
	S2JRF3_MUCC1	TPR_REGION domain-containing protein. (648 aa)
	S2JRZ0_MUCC1	Uncharacterized protein. (242 aa)
	S2JT54_MUCC1	AAA domain-containing protein. (1134 aa)
	S2JUF3_MUCC1	Uncharacterized protein. (1107 aa)
	S2K1J5_MUCC1	Pex14_N domain-containing protein. (331 aa)
	S2K9G6_MUCC1	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (242 aa)

Your Current Organism:

Mucor circinelloides f. circinelloides

NCBI taxonomy Id: 1220926
Other names: M. circinelloides f. circinelloides 1006PhL, Mucor circinelloides f. circinelloides 1006PhL, Mucor sp. 1006PhL

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
S2IUS8_MUCC1	S2J2E0_MUCC1	S2IUS8	S2J2E0	WD_REPEATS_REGION domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.572
S2IUS8_MUCC1	S2J523_MUCC1	S2IUS8	S2J523	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.486
S2IUS8_MUCC1	S2J7E9_MUCC1	S2IUS8	S2J7E9	WD_REPEATS_REGION domain-containing protein.	Peroxisomal membrane protein PEX16.	0.459
S2IUS8_MUCC1	S2J9H1_MUCC1	S2IUS8	S2J9H1	WD_REPEATS_REGION domain-containing protein.	SH3 domain-containing protein.	0.889
S2IUS8_MUCC1	S2JCP3_MUCC1	S2IUS8	S2JCP3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.464
S2IUS8_MUCC1	S2JE92_MUCC1	S2IUS8	S2JE92	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.509
S2IUS8_MUCC1	S2JK97_MUCC1	S2IUS8	S2JK97	WD_REPEATS_REGION domain-containing protein.	Peroxisomal membrane protein PEX16.	0.459
S2IUS8_MUCC1	S2JL24_MUCC1	S2IUS8	S2JL24	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.486
S2IUS8_MUCC1	S2JRF3_MUCC1	S2IUS8	S2JRF3	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.950
S2IUS8_MUCC1	S2JRZ0_MUCC1	S2IUS8	S2JRZ0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.464
S2IUS8_MUCC1	S2JT54_MUCC1	S2IUS8	S2JT54	WD_REPEATS_REGION domain-containing protein.	AAA domain-containing protein.	0.805
S2IUS8_MUCC1	S2JUF3_MUCC1	S2IUS8	S2JUF3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.805
S2IUS8_MUCC1	S2K1J5_MUCC1	S2IUS8	S2K1J5	WD_REPEATS_REGION domain-containing protein.	Pex14_N domain-containing protein.	0.968
S2J2E0_MUCC1	S2IUS8_MUCC1	S2J2E0	S2IUS8	AAA domain-containing protein; Belongs to the AAA ATPase family.	WD_REPEATS_REGION domain-containing protein.	0.572
S2J2E0_MUCC1	S2J523_MUCC1	S2J2E0	S2J523	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.713
S2J2E0_MUCC1	S2J769_MUCC1	S2J2E0	S2J769	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.621
S2J2E0_MUCC1	S2J7E9_MUCC1	S2J2E0	S2J7E9	AAA domain-containing protein; Belongs to the AAA ATPase family.	Peroxisomal membrane protein PEX16.	0.634
S2J2E0_MUCC1	S2J9H1_MUCC1	S2J2E0	S2J9H1	AAA domain-containing protein; Belongs to the AAA ATPase family.	SH3 domain-containing protein.	0.750
S2J2E0_MUCC1	S2J9Y9_MUCC1	S2J2E0	S2J9Y9	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.672
S2J2E0_MUCC1	S2JCP3_MUCC1	S2J2E0	S2JCP3	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.701