Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EME96357.1 | EME96843.1 | H340_31895 | H340_29509 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Putative calmodulin-like protein; COG5126 Ca2+-binding protein (EF-Hand superfamily). | 0.525 |
| EME96357.1 | EME96904.1 | H340_31895 | H340_29144 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Bilirubin oxidase; COG2132 Putative multicopper oxidases. | 0.714 |
| EME96357.1 | EME97192.1 | H340_31895 | H340_27691 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Hyaluronidase. | 0.503 |
| EME96357.1 | EME97307.1 | H340_31895 | H340_27175 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Hypothetical protein; COG0666 FOG: Ankyrin repeat. | 0.482 |
| EME96357.1 | EME97663.1 | H340_31895 | H340_25387 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Hypothetical protein. | 0.904 |
| EME96357.1 | EME98621.1 | H340_31895 | H340_20388 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. | 0.407 |
| EME96357.1 | EME98627.1 | H340_31895 | H340_20418 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Ankyrin-like protein; COG0666 FOG: Ankyrin repeat. | 0.482 |
| EME96357.1 | EME99013.1 | H340_31895 | H340_18696 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Hypothetical protein. | 0.482 |
| EME96357.1 | EME99203.1 | H340_31895 | H340_17732 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | alpha-N-acetylglucosaminidase. | 0.403 |
| EME96357.1 | EME99433.1 | H340_31895 | H340_16581 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Hypothetical protein. | 0.553 |
| EME96357.1 | EME99967.1 | H340_31895 | H340_13841 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Proteinase inhibitor I4 serpin; COG4826 Serine protease inhibitor; Belongs to the serpin family. | 0.852 |
| EME96357.1 | EMF00350.1 | H340_31895 | H340_11595 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | Putative calcium-binding protein. | 0.414 |
| EME96357.1 | EMF02281.1 | H340_31895 | H340_02234 | Peptidase S1 and S6 chymotrypsin/Hap; COG5640 Secreted trypsin-like serine protease. | COG2132 Putative multicopper oxidases. | 0.714 |
| EME96461.1 | EME97307.1 | H340_31413 | H340_27175 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Hypothetical protein; COG0666 FOG: Ankyrin repeat. | 0.437 |
| EME96461.1 | EMF00194.1 | H340_31413 | H340_12425 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Protease; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.811 |
| EME96461.1 | alaS-2 | H340_31413 | H340_18541 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | alanyl-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.530 |
| EME96461.1 | arc | H340_31413 | H340_16371 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.924 |
| EME96461.1 | prcA | H340_31413 | H340_16391 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 20S proteasome subunits A and B; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.498 |
| EME96461.1 | prcB | H340_31413 | H340_16386 | COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 20S proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. | 0.498 |
| EME96612.1 | EME97013.1 | H340_30588 | H340_28602 | NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein; COG0572 Uridine kinase. | 0.799 |
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