(13 nodes) Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal network (Bradyrhizobium sp. CCGELA001)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AMA56689.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
	AMA56690.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	AMA56691.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
	AMA56692.1	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (562 aa)
	AMA59959.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	AMA59960.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AMA59961.1	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (332 aa)
	oppD-2	Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (328 aa)
	AMA61561.1	Oligopeptide ABC transpoter oligopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
	AMA60654.1	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
	AMA60655.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AMA60656.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
	AMA61656.1	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (539 aa)

Your Current Organism:

Bradyrhizobium sp. CCGELA001

NCBI taxonomy Id: 1223566
Other names: B. sp. CCGE-LA001, Bradyrhizobium sp. CCGE-LA001

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMA56689.1	AMA56690.1	BCCGELA001_10780	BCCGELA001_10785	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
AMA56689.1	AMA56691.1	BCCGELA001_10780	BCCGELA001_10790	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
AMA56689.1	AMA56692.1	BCCGELA001_10780	BCCGELA001_10795	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.835
AMA56689.1	AMA59959.1	BCCGELA001_10780	BCCGELA001_29390	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
AMA56689.1	AMA59960.1	BCCGELA001_10780	BCCGELA001_29395	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.669
AMA56689.1	AMA60655.1	BCCGELA001_10780	BCCGELA001_33565	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
AMA56689.1	AMA60656.1	BCCGELA001_10780	BCCGELA001_33570	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
AMA56690.1	AMA56689.1	BCCGELA001_10785	BCCGELA001_10780	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
AMA56690.1	AMA56691.1	BCCGELA001_10785	BCCGELA001_10790	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AMA56690.1	AMA56692.1	BCCGELA001_10785	BCCGELA001_10795	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.921
AMA56690.1	AMA59959.1	BCCGELA001_10785	BCCGELA001_29390	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AMA56690.1	AMA59961.1	BCCGELA001_10785	BCCGELA001_29400	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.753
AMA56690.1	AMA60654.1	BCCGELA001_10785	BCCGELA001_33560	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846
AMA56690.1	AMA60656.1	BCCGELA001_10785	BCCGELA001_33570	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
AMA56690.1	AMA61561.1	BCCGELA001_10785	BCCGELA001_29410	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transpoter oligopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
AMA56690.1	AMA61656.1	BCCGELA001_10785	BCCGELA001_33575	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.690
AMA56690.1	oppD-2	BCCGELA001_10785	BCCGELA001_29405	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.812
AMA56691.1	AMA56689.1	BCCGELA001_10790	BCCGELA001_10780	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
AMA56691.1	AMA56690.1	BCCGELA001_10790	BCCGELA001_10785	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AMA56691.1	AMA56692.1	BCCGELA001_10790	BCCGELA001_10795	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.955