STRINGSTRING
ugpE ugpE ugpC ugpC AMA54897.1 AMA54897.1 AMA55100.1 AMA55100.1 AMA55540.1 AMA55540.1 AMA61028.1 AMA61028.1 AMA55566.1 AMA55566.1 AMA55777.1 AMA55777.1 AMA61065.1 AMA61065.1 AMA56379.1 AMA56379.1 AMA61142.1 AMA61142.1 AMA56511.1 AMA56511.1 potA potA AMA56577.1 AMA56577.1 AMA56635.1 AMA56635.1 AMA56636.1 AMA56636.1 AMA56953.1 AMA56953.1 AMA56954.1 AMA56954.1 AMA57003.1 AMA57003.1 AMA57273.1 AMA57273.1 AMA57330.1 AMA57330.1 AMA57347.1 AMA57347.1 AMA57348.1 AMA57348.1 AMA57392.1 AMA57392.1 AMA61260.1 AMA61260.1 AMA57506.1 AMA57506.1 AMA57662.1 AMA57662.1 AMA57671.1 AMA57671.1 AMA57780.1 AMA57780.1 AMA57818.1 AMA57818.1 AMA57819.1 AMA57819.1 AMA57845.1 AMA57845.1 AMA61315.1 AMA61315.1 AMA58155.1 AMA58155.1 AMA58240.1 AMA58240.1 tatC tatC tatB tatB tatA tatA AMA58417.1 AMA58417.1 AMA58418.1 AMA58418.1 lolD lolD AMA58447.1 AMA58447.1 AMA58471.1 AMA58471.1 nuoK nuoK nuoI nuoI AMA58479.1 AMA58479.1 nuoB nuoB nuoB-2 nuoB-2 AMA58948.1 AMA58948.1 AMA61425.1 AMA61425.1 AMA59220.1 AMA59220.1 AMA59329.1 AMA59329.1 AMA59339.1 AMA59339.1 AMA61481.1 AMA61481.1 AMA59419.1 AMA59419.1 AMA59671.1 AMA59671.1 AMA59692.1 AMA59692.1 AMA61568.1 AMA61568.1 AMA60000.1 AMA60000.1 AMA60001.1 AMA60001.1 potA-2 potA-2 AMA60316.1 AMA60316.1 hmuV hmuV AMA60337.1 AMA60337.1 AMA60339.1 AMA60339.1 potA-3 potA-3 AMA60388.1 AMA60388.1 AMA60417.1 AMA60417.1 AMA60418.1 AMA60418.1 cysA cysA cysW cysW AMA60837.1 AMA60837.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ugpEGlycerol-3-phosphate transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)
ugpCGlycerol-3-phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (362 aa)
AMA54897.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AMA55100.1Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
AMA55540.1Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AMA61028.1Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
AMA55566.1Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
AMA55777.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AMA61065.1Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
AMA56379.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (359 aa)
AMA61142.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
AMA56511.1Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
potASpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (369 aa)
AMA56577.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
AMA56635.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
AMA56636.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AMA56953.1Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (549 aa)
AMA56954.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
AMA57003.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (900 aa)
AMA57273.1ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
AMA57330.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
AMA57347.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
AMA57348.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (335 aa)
AMA57392.1Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
AMA61260.1Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
AMA57506.1Metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AMA57662.1Biopolymer transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
AMA57671.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (355 aa)
AMA57780.1Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AMA57818.1LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
AMA57819.1LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
AMA57845.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
AMA61315.1Quaternary ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
AMA58155.1DL-methionine transporter permease subunit; Part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
AMA58240.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (366 aa)
tatCMttB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (270 aa)
tatBPreprotein translocase subunit TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (164 aa)
tatAPreprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (78 aa)
AMA58417.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
AMA58418.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (369 aa)
lolDABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (232 aa)
AMA58447.1Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
AMA58471.1NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
nuoINADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
AMA58479.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
nuoBNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (195 aa)
nuoB-2NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (187 aa)
AMA58948.1Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (328 aa)
AMA61425.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
AMA59220.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
AMA59329.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (696 aa)
AMA59339.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
AMA61481.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)
AMA59419.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
AMA59671.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (361 aa)
AMA59692.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
AMA61568.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (364 aa)
AMA60000.1Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
AMA60001.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
potA-2Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (364 aa)
AMA60316.1Biopolymer transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
hmuVIron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (266 aa)
AMA60337.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
AMA60339.1Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
potA-3ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (390 aa)
AMA60388.1Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AMA60417.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
AMA60418.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (346 aa)
cysASulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (344 aa)
cysWPart of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
AMA60837.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
Your Current Organism:
Bradyrhizobium sp. CCGELA001
NCBI taxonomy Id: 1223566
Other names: B. sp. CCGE-LA001, Bradyrhizobium sp. CCGE-LA001
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