(85 nodes) CheY-like superfamily network (Sulfuritalea hydrogenivorans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BAO29527.1	Putative response regulator. (524 aa)
	ntrC	Nitrogen assimilation response regulator; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (474 aa)
	BAO27948.1	Nitrogen assimilation regulatory protein. (411 aa)
	basR	Two-component response regulatory protein; K07774. (231 aa)
	BAO28033.1	Fis family transcriptional regulator; K07713. (460 aa)
	BAO28099.1	Response regulator receiver protein; K03413. (130 aa)
	BAO28207.1	PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase. (1332 aa)
	BAO28245.1	Fis family transcriptional regulator; K06714. (431 aa)
	BAO28248.1	Two component, sigma54 specific, transcriptional regulator, Fis family; K02481. (439 aa)
	atoC	Fis family transcriptional regulator; K07713. (458 aa)
	BAO28307.1	Two component transcriptional regulator, winged helix family; K02483. (231 aa)
	BAO28424.1	Heavy metal response regulator; K07665. (226 aa)
	BAO28430.1	Two component transcriptional regulator, LuxR family. (211 aa)
	BAO28449.1	Two-component response regulator. (213 aa)
	BAO28699.1	Putative chemotaxis protein CheY; K03413. (121 aa)
	cheB	Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (357 aa)
	cheV1	Chemotaxis protein CheV-like; K03415. (323 aa)
	cheV2	Chemotaxis protein CheV-like; K03415. (327 aa)
	BAO28710.1	Response regulator receiver; K03413. (133 aa)
	BAO28750.1	Sigma-54 dependent response regulator; K10943. (464 aa)
	BAO28808.1	Response regulator receiver/ANTAR domain-containing protein; K07183. (191 aa)
	BAO28826.1	PAS domain S-box. (949 aa)
	BAO28851.1	C4-dicarboxylate transport transcriptional regulator, LuxR/FixJ family; K14987. (205 aa)
	BAO28952.1	Two component response regulator; K02483. (220 aa)
	BAO28986.1	Hypothetical protein; K07648. (764 aa)
	BAO29057.1	Response regulator receiver; K03413. (261 aa)
	BAO29193.1	Two component LuxR family transcriptionalregulator; K07684. (227 aa)
	BAO29264.1	Two sigma54 transcriptional regulator; K07715. (434 aa)
	BAO30357.1	Fis family transcriptional regulator; K15012. (184 aa)
	BAO30384.1	Hypothetical protein; K07648. (1152 aa)
	BAO30434.1	Hypothetical protein. (844 aa)
	BAO30435.1	Response regulator receiver sensor signal transduction histidine kinase. (397 aa)
	BAO30520.1	Diguanylate cyclase. (576 aa)
	BAO30521.1	Putative two-component response regulator receiver protein. (130 aa)
	BAO30526.1	Response regulator receiver protein; K02485. (123 aa)
	BAO30638.1	Fis family transcriptional regulator. (493 aa)
	BAO30662.1	PAS. (519 aa)
	BAO30663.1	Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains. (303 aa)
	BAO30670.1	PAS; K07716. (1104 aa)
	BAO30671.1	Response regulator containing a CheY-like receiver domain and an HD-GYP domain; K14491. (371 aa)
	BAO30672.1	Response regulator receiver. (373 aa)
	BAO30752.1	Response regulator. (631 aa)
	BAO30784.1	Two component sigma-54 specific Fis family transcriptional regulator; K02667. (456 aa)
	BAO30788.1	Alginate biosynthesis regulatory protein; K08083. (254 aa)
	BAO30836.1	Hypothetical protein. (539 aa)
	BAO30921.1	Integral membrane sensor hybrid histidine kinase. (597 aa)
	BAO30923.1	Winged helix family two component transcriptional regulator; K02483. (220 aa)
	BAO30987.1	Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. (733 aa)
	BAO30988.1	LuxR family transcriptional regulator. (222 aa)
	BAO31012.1	Signaling protein. (738 aa)
	BAO31033.1	Hypothetical protein. (105 aa)
	BAO31047.1	Complex two-component hybrid sensor protein. (632 aa)
	BAO31190.1	Response regulator receiver; K02657. (130 aa)
	BAO31191.1	Response regulator receiver protein; K02658. (121 aa)
	BAO31194.1	Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; K06596. (1845 aa)
	BAO31204.1	Transcriptional regulatory protein OmpR; K02483. (234 aa)
	BAO31262.1	Hypothetical protein; K03413. (264 aa)
	phoB	Phosphate regulon transcriptional regulatory protein; K07657. (228 aa)
	BAO29551.1	Multi-sensor hybrid histidine kinase; K11527. (923 aa)
	BAO29554.1	Two component transcriptional regulator; K07667. (232 aa)
	ompR	Osmolarity response regulator; K07659. (243 aa)
	BAO29581.1	LuxR family transcriptional regulator; K07687. (214 aa)
	BAO29619.1	Response regulator receiver protein; K02485. (121 aa)
	BAO29622.1	Hypothetical protein. (231 aa)
	BAO29627.1	Response regulator receiver protein. (132 aa)
	BAO29629.1	Response regulator receiver protein. (125 aa)
	BAO29631.1	Response regulator receiver protein. (201 aa)
	BAO29792.1	Sensory transduction histidine kinase. (508 aa)
	BAO29793.1	Response regulator receiver, LuxR family; K07689. (213 aa)
	BAO29810.1	Fis family two component sigma-54 specific transcriptional regulator. (480 aa)
	BAO29850.1	Two component transcriptional regulator LuxR family. (202 aa)
	BAO29882.1	Response regulator containing a CheY-like receiver domain and a GGDEF domain. (568 aa)
	BAO29883.1	Response regulator; K07814. (386 aa)
	BAO29886.1	PAS domain S-box. (1491 aa)
	BAO29888.1	COG0642: Signal transduction histidine kinase; K11527. (1580 aa)
	BAO29901.1	Putative response regulator. (522 aa)
	BAO30094.1	Response regulator receiver; K02485. (121 aa)
	BAO30136.1	PAS domain S-box. (981 aa)
	BAO30248.1	Response regulator of the LytR/AlgR family; K02477. (252 aa)
	BAO30262.1	PAS. (1297 aa)
	BAO30263.1	Response regulator receiver modulated diguanylate cyclase; K02488. (313 aa)
	BAO30288.1	Response regulator receiver; K07183. (193 aa)
	BAO30290.1	PAS. (1585 aa)
	BAO30291.1	Response regulator receiver modulated metal dependent phosphohydrolase; K14491. (378 aa)
	BAO30292.1	Response regulator receiver; K14492. (380 aa)

Your Current Organism:

Sulfuritalea hydrogenivorans

NCBI taxonomy Id: 1223802
Other names: S. hydrogenivorans sk43H, Sulfuritalea hydrogenivorans DSM 22779, Sulfuritalea hydrogenivorans sk43H, Sulfuritalea hydrogenivorans str. sk43H, Sulfuritalea hydrogenivorans strain sk43H, sulfur-oxidizing bacterium DSM 22779

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAO27948.1	BAO29551.1	SUTH_00128	SUTH_01759	Nitrogen assimilation regulatory protein.	Multi-sensor hybrid histidine kinase; K11527.	0.522
BAO27948.1	BAO29619.1	SUTH_00128	SUTH_01827	Nitrogen assimilation regulatory protein.	Response regulator receiver protein; K02485.	0.533
BAO27948.1	BAO29627.1	SUTH_00128	SUTH_01835	Nitrogen assimilation regulatory protein.	Response regulator receiver protein.	0.566
BAO27948.1	BAO29629.1	SUTH_00128	SUTH_01837	Nitrogen assimilation regulatory protein.	Response regulator receiver protein.	0.537
BAO27948.1	BAO29886.1	SUTH_00128	SUTH_02095	Nitrogen assimilation regulatory protein.	PAS domain S-box.	0.455
BAO27948.1	BAO29888.1	SUTH_00128	SUTH_02097	Nitrogen assimilation regulatory protein.	COG0642: Signal transduction histidine kinase; K11527.	0.422
BAO27948.1	BAO30262.1	SUTH_00128	SUTH_02479	Nitrogen assimilation regulatory protein.	PAS.	0.455
BAO27948.1	BAO30290.1	SUTH_00128	SUTH_02507	Nitrogen assimilation regulatory protein.	PAS.	0.518
BAO27948.1	BAO30434.1	SUTH_00128	SUTH_02654	Nitrogen assimilation regulatory protein.	Hypothetical protein.	0.448
BAO27948.1	BAO30662.1	SUTH_00128	SUTH_02883	Nitrogen assimilation regulatory protein.	PAS.	0.407
BAO27948.1	BAO31194.1	SUTH_00128	SUTH_03424	Nitrogen assimilation regulatory protein.	Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; K06596.	0.490
BAO28033.1	BAO29551.1	SUTH_00215	SUTH_01759	Fis family transcriptional regulator; K07713.	Multi-sensor hybrid histidine kinase; K11527.	0.455
BAO28033.1	BAO29886.1	SUTH_00215	SUTH_02095	Fis family transcriptional regulator; K07713.	PAS domain S-box.	0.455
BAO28033.1	BAO29888.1	SUTH_00215	SUTH_02097	Fis family transcriptional regulator; K07713.	COG0642: Signal transduction histidine kinase; K11527.	0.422
BAO28033.1	BAO30262.1	SUTH_00215	SUTH_02479	Fis family transcriptional regulator; K07713.	PAS.	0.455
BAO28033.1	BAO30290.1	SUTH_00215	SUTH_02507	Fis family transcriptional regulator; K07713.	PAS.	0.455
BAO28033.1	BAO31194.1	SUTH_00215	SUTH_03424	Fis family transcriptional regulator; K07713.	Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; K06596.	0.490
BAO28099.1	BAO28699.1	SUTH_00283	SUTH_00893	Response regulator receiver protein; K03413.	Putative chemotaxis protein CheY; K03413.	0.918
BAO28099.1	BAO28710.1	SUTH_00283	SUTH_00904	Response regulator receiver protein; K03413.	Response regulator receiver; K03413.	0.901
BAO28099.1	BAO28826.1	SUTH_00283	SUTH_01020	Response regulator receiver protein; K03413.	PAS domain S-box.	0.423

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