STRINGSTRING
SFC10070.1 SFC10070.1 crgA crgA SFC36216.1 SFC36216.1 whiB whiB whiB-2 whiB-2 SFC56532.1 SFC56532.1 SFC57531.1 SFC57531.1 whiB-4 whiB-4 SFC63986.1 SFC63986.1 SFD18522.1 SFD18522.1 SFD18600.1 SFD18600.1 SFD18626.1 SFD18626.1 SFD18653.1 SFD18653.1 SFD19095.1 SFD19095.1 SFD46005.1 SFD46005.1 SFD47953.1 SFD47953.1 SFD48187.1 SFD48187.1 SFD49085.1 SFD49085.1 SFD53731.1 SFD53731.1 SFD79627.1 SFD79627.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFC10070.12-Methylisocitrate lyase, PEP mutase family. (257 aa)
crgAUncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family. (90 aa)
SFC36216.1Hypothetical protein. (127 aa)
whiBWhiB family transcriptional regulator, redox-sensing transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (99 aa)
whiB-2Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (123 aa)
SFC56532.1Putative hydrolase. (471 aa)
SFC57531.1Two-component sensor histidine kinase, contains HisKA and HATPase domains. (496 aa)
whiB-4Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (83 aa)
SFC63986.1Protein of unknown function. (111 aa)
SFD18522.1Protein of unknown function. (99 aa)
SFD18600.1Protein of unknown function. (245 aa)
SFD18626.1ATP-dependent DNA helicase RecG. (125 aa)
SFD18653.1Protein of unknown function. (260 aa)
SFD19095.1Protein of unknown function. (213 aa)
SFD46005.1Protein of unknown function; Manually curated. (166 aa)
SFD47953.1Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...] (1028 aa)
SFD48187.1Protein of unknown function. (260 aa)
SFD49085.1Protein of unknown function. (199 aa)
SFD53731.1Response regulator receiver and ANTAR domain protein. (217 aa)
SFD79627.1Transcriptional regulator, contains XRE-family HTH domain. (119 aa)
Your Current Organism:
Klenkia taihuensis
NCBI taxonomy Id: 1225127
Other names: CGMCC 1.12303, DSM 45962, Geodermatophilus taihuensis, Geodermatophilus taihuensis Qu et al. 2013, K. taihuensis, Klenkia taihuensis (Qu et al. 2013) Montero-Calasanz et al. 2018, NBRC 109416, bacterium 3-wff-81, strain 3-wff-81
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