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glmS-2 glmS-2 C494_02955 C494_02955 C494_03025 C494_03025 C494_03210 C494_03210 Icd Icd C494_06240 C494_06240 C494_06805 C494_06805 AcnA AcnA C494_07340 C494_07340 C494_07955 C494_07955 C494_08252 C494_08252 mer mer C494_09920 C494_09920 C494_09950 C494_09950 C494_10605 C494_10605 C494_12355 C494_12355 SdhC SdhC C494_12490 C494_12490 C494_12495 C494_12495 C494_12856 C494_12856 C494_13061 C494_13061 C494_13071 C494_13071 C494_13076 C494_13076 C494_13091 C494_13091 C494_13096 C494_13096 C494_13101 C494_13101 C494_13106 C494_13106 C494_13996 C494_13996 C494_14588 C494_14588 C494_14593 C494_14593 C494_14608 C494_14608 C494_15923 C494_15923 C494_16013 C494_16013 C494_16403 C494_16403 C494_16408 C494_16408 C494_16413 C494_16413 fumC fumC C494_17333 C494_17333 C494_17338 C494_17338 sucD sucD sucC sucC C494_17678 C494_17678 C494_18311 C494_18311 C494_19747 C494_19747 C494_19752 C494_19752 C494_19767 C494_19767 C494_19967 C494_19967 C494_00140 C494_00140 C494_00277 C494_00277 C494_01492 C494_01492 glmE glmE glmS glmS C494_01746 C494_01746 glpC glpC C494_02216 C494_02216
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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glmS-2Methylaspartate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (149 aa)
C494_02955Metallophosphoesterase; COG2129 Predicted phosphoesterases, related to the Icc protein. (224 aa)
C494_030252-methylcitrate synthase/citrate synthase II; COG0372 Citrate synthase. (382 aa)
C494_03210COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (332 aa)
IcdCOG0538 Isocitrate dehydrogenases. (420 aa)
C494_06240COG0039 Malate/lactate dehydrogenases; Belongs to the LDH/MDH superfamily. (304 aa)
C494_06805CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming). (698 aa)
AcnAAconitate hydratase; COG1048 Aconitase A. (911 aa)
C494_07340G6PDH family F420-dependent oxidoreductase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (319 aa)
C494_07955Luciferase-like protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (340 aa)
C494_08252Hypothetical protein. (285 aa)
merMethylenetetrahydromethanopterin reductase; Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT. (339 aa)
C494_09920Protein SucC2; COG1042 Acyl-CoA synthetase (NDP forming). (734 aa)
C494_09950Aconitate hydratase; COG1048 Aconitase A. (656 aa)
C494_10605Luciferase-type oxidoreductase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (306 aa)
C494_12355Cobalamin B12-binding domain-containing protein; COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). (138 aa)
SdhCCOG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit. (131 aa)
C494_12490Succinate dehydrogenase subunit D. (121 aa)
C494_12495COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit. (292 aa)
C494_12856COG2322 Predicted membrane protein. (200 aa)
C494_13061COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; Belongs to the complex I 20 kDa subunit family. (235 aa)
C494_13071NADH dehydrogenase (quinone); COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H). (358 aa)
C494_13076COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I). (153 aa)
C494_13091COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K). (101 aa)
C494_13096COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit. (678 aa)
C494_13101COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M). (508 aa)
C494_13106COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N). (509 aa)
C494_13996HpcH/HpaI aldolase; COG2301 Citrate lyase beta subunit. (436 aa)
C494_145884Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1. (287 aa)
C494_14593Anaerobic dehydrogenase membrane anchor subunit; COG5557 Polysulphide reductase. (453 aa)
C494_14608Methyl-viologen-reducing hydrogenase subunit delta; COG1148 Heterodisulfide reductase, subunit A and related polyferredoxins. (701 aa)
C494_15923COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (327 aa)
C494_16013Cobalamin B12-binding domain-containing protein; COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding). (138 aa)
C494_16403NADH/ubiquinone/plastoquinone; COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit. (506 aa)
C494_16408COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name. (654 aa)
C494_16413COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name. (618 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (472 aa)
C494_173334Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1. (591 aa)
C494_17338Polysulfide reductase NrfD; COG5557 Polysulphide reductase. (455 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (383 aa)
C494_176784Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1. (450 aa)
C494_18311COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. (826 aa)
C494_19747COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (491 aa)
C494_19752COG1294 Cytochrome bd-type quinol oxidase, subunit 2. (331 aa)
C494_19767COG0579 Predicted dehydrogenase. (447 aa)
C494_19967Hypothetical protein; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (345 aa)
C494_00140COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family. (595 aa)
C494_00277COG2352 Phosphoenolpyruvate carboxylase. (896 aa)
C494_01492HpcH/HpaI aldolase; COG2301 Citrate lyase beta subunit. (347 aa)
glmEGlutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (479 aa)
glmSMethylaspartate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate). (151 aa)
C494_01746COG2322 Predicted membrane protein. (187 aa)
glpCSn-glycerol-3-phosphate dehydrogenase subunit C; COG0247 Fe-S oxidoreductase. (473 aa)
C494_02216COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases. (334 aa)
Your Current Organism:
Natronorubrum bangense
NCBI taxonomy Id: 1227500
Other names: N. bangense JCM 10635, Natronorubrum bangense JCM 10635
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