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AFT85503.1 AFT85503.1 AFT85504.1 AFT85504.1 AFT85506.1 AFT85506.1 AFT86793.1 AFT86793.1 AFT85502.1 AFT85502.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFT85503.1RNA polymerase sigma-70 factor, ECF subfamily; Identified by sequence similarity; putative; Belongs to the sigma-70 factor family. ECF subfamily. (183 aa)
AFT85504.1Transmembrane anti-sigma factor; Identified by sequence similarity; putative. (276 aa)
AFT85506.1Hypothetical protein. (139 aa)
AFT86793.1Lipoprotein; Identified by sequence similarity; putative. (96 aa)
AFT85502.1Hypothetical protein. (49 aa)
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
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