STRINGSTRING
AFT88563.1 AFT88563.1 AFT88564.1 AFT88564.1 AFT89593.1 AFT89593.1 AFT89592.1 AFT89592.1 AFT89588.1 AFT89588.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFT88563.15-dehydro-4-deoxyglucarate dehydratase; Identified by sequence similarity; putative; Belongs to the DapA family. (305 aa)
AFT88564.1Glucarate dehydratase; Identified by sequence similarity; putative. (449 aa)
AFT89593.1Galactarate dehydratase; Identified by sequence similarity; putative. (529 aa)
AFT89592.15-dehydro-4-deoxyglucarate dehydratase; Identified by sequence similarity; putative; Belongs to the DapA family. (305 aa)
AFT89588.12-dehydro-3-deoxyglucarate aldolase; Identified by sequence similarity; putative; Belongs to the HpcH/HpaI aldolase family. (268 aa)
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
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