STRINGSTRING
nicP_2 nicP_2 GCA_000497835_00585 GCA_000497835_00585 madA madA citG citG mdcC mdcC madC madC mdcG mdcG GCA_000497835_03901 GCA_000497835_03901 GCA_000497835_03902 GCA_000497835_03902 gltC_8 gltC_8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nicP_2Porin-like protein NicP. (452 aa)
GCA_000497835_00585Hypothetical protein. (373 aa)
madAAcetyl-S-ACP:malonate ACP transferase. (558 aa)
citG2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase. (290 aa)
mdcCMalonate decarboxylase acyl carrier protein. (99 aa)
madCMalonyl-S-ACP:biotin-protein carboxyltransferase MADC. (534 aa)
mdcGPhosphoribosyl-dephospho-CoA transferase. (183 aa)
GCA_000497835_03901Hypothetical protein. (135 aa)
GCA_000497835_03902Hypothetical protein. (255 aa)
gltC_8HTH-type transcriptional regulator GltC. (304 aa)
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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