STRINGSTRING
fbpC2_1 fbpC2_1 potF potF GCA_000497835_02427 GCA_000497835_02427 potA_2 potA_2 ydcU ydcU ydcV_1 ydcV_1 cysW_2 cysW_2 GCA_000497835_03648 GCA_000497835_03648 spuD_3 spuD_3 potA_3 potA_3 potH_1 potH_1 ydcV_2 ydcV_2 potA_4 potA_4 potD_1 potD_1 potH_2 potH_2 ydcV_3 ydcV_3 fbpC fbpC phnV_2 phnV_2 fbpA fbpA potD_2 potD_2 potH_3 potH_3 ydcV_4 ydcV_4 cysA_3 cysA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fbpC2_1Fe(3+) ions import ATP-binding protein FbpC 2. (347 aa)
potFPutrescine-binding periplasmic protein. (214 aa)
GCA_000497835_02427Hypothetical protein. (161 aa)
potA_2Spermidine/putrescine import ATP-binding protein PotA. (342 aa)
ydcUInner membrane ABC transporter permease protein YdcU. (316 aa)
ydcV_1Inner membrane ABC transporter permease protein YdcV. (269 aa)
cysW_2Sulfate transport system permease protein CysW. (532 aa)
GCA_000497835_03648Putative binding protein component of ABC iron transporter. (333 aa)
spuD_3Putrescine-binding periplasmic protein SpuD. (365 aa)
potA_3Spermidine/putrescine import ATP-binding protein PotA. (380 aa)
potH_1Putrescine transport system permease protein PotH. (306 aa)
ydcV_2Inner membrane ABC transporter permease protein YdcV. (297 aa)
potA_4Spermidine/putrescine import ATP-binding protein PotA. (369 aa)
potD_1Spermidine/putrescine-binding periplasmic protein. (343 aa)
potH_2Putrescine transport system permease protein PotH. (415 aa)
ydcV_3Inner membrane ABC transporter permease protein YdcV. (274 aa)
fbpCFe(3+) ions import ATP-binding protein FbpC. (344 aa)
phnV_2Putative 2-aminoethylphosphonate transport system permease protein PhnV. (475 aa)
fbpAFe(3+)-binding periplasmic protein. (335 aa)
potD_2Spermidine/putrescine-binding periplasmic protein. (341 aa)
potH_3Putrescine transport system permease protein PotH. (311 aa)
ydcV_4Inner membrane ABC transporter permease protein YdcV. (273 aa)
cysA_3Sulfate/thiosulfate import ATP-binding protein CysA. (383 aa)
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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