STRINGSTRING
trpS trpS GCA_000497835_00272 GCA_000497835_00272 GCA_000497835_02154 GCA_000497835_02154 GCA_000497835_02155 GCA_000497835_02155 GCA_000497835_02156 GCA_000497835_02156 GCA_000497835_02157 GCA_000497835_02157 GCA_000497835_02158 GCA_000497835_02158 GCA_000497835_02159 GCA_000497835_02159 GCA_000497835_02160 GCA_000497835_02160 GCA_000497835_02161 GCA_000497835_02161 GCA_000497835_02162 GCA_000497835_02162 GCA_000497835_02163 GCA_000497835_02163 GCA_000497835_04628 GCA_000497835_04628 GCA_000497835_04746 GCA_000497835_04746
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trpSTryptophan--tRNA ligase. (449 aa)
GCA_000497835_00272Hypothetical protein. (52 aa)
GCA_000497835_02154Hypothetical protein. (568 aa)
GCA_000497835_02155Hypothetical protein. (105 aa)
GCA_000497835_02156Hypothetical protein. (391 aa)
GCA_000497835_02157Hypothetical protein. (174 aa)
GCA_000497835_02158Hypothetical protein. (582 aa)
GCA_000497835_02159Hypothetical protein. (235 aa)
GCA_000497835_02160Hypothetical protein. (271 aa)
GCA_000497835_02161Hypothetical protein. (158 aa)
GCA_000497835_02162Hypothetical protein. (230 aa)
GCA_000497835_02163Hypothetical protein. (323 aa)
GCA_000497835_04628Hypothetical protein. (82 aa)
GCA_000497835_04746Hypothetical protein. (341 aa)
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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